|
ENSP00000418684-D1
(Bos grunniens)
C2H2 ZF
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00096 (zf-C2H2) |
IPR007087 |
ENSP00000418684-D1 |
T135615_2.00 |
GigaDB (2015-Oct-22) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
IKZF3
M08320_2.00 |
Homo sapiens |
TTCCCNNSB |
VSNNGGGAA |
ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE
|
0.827
|
1.000
|
IKZF1
M08939_2.00 |
Homo sapiens |
HYTCCCAV |
BTGGGARD |
Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C
|
0.790
|
0.879
|
Ikzf1
M08969_2.00 |
Mus musculus |
HYTCCCAV |
BTGGGARD |
Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C
|
0.790
|
0.879
|
IKZF1
M10301_2.00 |
Homo sapiens |
NHBYGGGAAYRYB |
VRYRTTCCCRVDN |
Transfac
Matys et al.(2006)
V$IK1_01
|
0.790
|
0.879
|
IKZF1
M10302_2.00 |
Homo sapiens |
BNNWTCCCRNNN |
NNNYGGGAWNNV |
Transfac
Matys et al.(2006)
V$IK2_01
|
0.790
|
0.879
|
IKZF1
M10303_2.00 |
Homo sapiens |
KNYHGGGAAYRYY |
RRYRTTCCCDRNM |
Transfac
Matys et al.(2006)
V$IK3_01
|
0.790
|
0.879
|
IKZF1
M10304_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IK_Q5_01
|
0.790
|
0.879
|
IKZF1
M10305_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$IK_Q5
|
0.790
|
0.879
|
IKZF1
M10306_2.00 |
Homo sapiens |
YYTCCCARA |
TYTGGGARR |
Transfac
Matys et al.(2006)
V$LYF1_01
|
0.790
|
0.879
|
IKZF2
M10105_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HELIOSA_01
|
0.776
|
0.846
|
IKZF2
M10106_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$HELIOSA_02
|
0.776
|
0.846
|
For this family, TFs with SR scores > 0.755 will likely have a similar motif |