Gfo_R000202 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R000202 T135644_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB20
M04599_2.00
Homo sapiens
NVYATACRTYVN

NBRAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_HT-SELEX
0.783 0.991
ZBTB20
M04600_2.00
Homo sapiens
NVYATACRTTNN

NNAAYGTATRBN
SELEX
Yin et al.(2017)
ZBTB20_eDBD_Methyl-HT-SELEX
0.783 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R000202 C2H2 ZF 577 599
Gfo_R000202 C2H2 ZF 605 627
Gfo_R000202 C2H2 ZF 633 655
Gfo_R000202 C2H2 ZF 661 683
Gfo_R000202 C2H2 ZF 713 735

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action