CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gfo_R000617
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R000617
T135649_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R000617
C2H2 ZF
420
442
HKCRFCAKVFGSDSALQIHLRSH
Gfo_R000617
C2H2 ZF
448
470
FKCNICGNRFSTKGNLKVHFQRH
Gfo_R000617
C2H2 ZF
687
708
QCVICHRVLSCQSALKMHYRTH
Gfo_R000617
C2H2 ZF
714
736
FKCKICGRAFTTKGNLKTHFGVH
Gfo_R000617
C2H2 ZF
746
768
HSCPICQKKFTNAVVLQQHIRMH
Gfo_R000617
C2H2 ZF
992
1014
TVCNICGKPFACKSALEIHYRSH
Gfo_R000617
C2H2 ZF
1020
1042
FVCTVCSRGCSTMGNLKQHLLTH
Gfo_R000617
C2H2 ZF
1128
1150
HNCQSCGKTFSSASALQIHERTH
Gfo_R000617
C2H2 ZF
1156
1178
FGCTICGRAFTTKGNLKVHMGTH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy