CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R000665
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R000665
T135650_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIVEP2
M10101_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MIBP1_Q6
0.780
0.880
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R000665
C2H2 ZF
376
398
YVCEYCNRACAKPSVLQKHIRSH
Gfo_R000665
C2H2 ZF
404
426
YPCVTCGFSFKTKSNLYKHKKSH
Gfo_R000665
C2H2 ZF
2028
2050
YICEECGIRCKKPSMLKKHIRTH
Gfo_R000665
C2H2 ZF
2056
2080
YHCNYCNFSFKTKGNLTKHMKSKAH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy