Gfo_R002581 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R002581 T135679_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB11
M10112_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB11_03
0.779 0.897
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R002581 C2H2 ZF 453 475
Gfo_R002581 C2H2 ZF 481 503
Gfo_R002581 C2H2 ZF 532 554
Gfo_R002581 C2H2 ZF 560 582
Gfo_R002581 C2H2 ZF 588 610
Gfo_R002581 C2H2 ZF 616 638
Gfo_R002581 C2H2 ZF 647 669
Gfo_R002581 C2H2 ZF 703 727
Gfo_R002581 C2H2 ZF 740 761
Gfo_R002581 C2H2 ZF 767 789
Gfo_R002581 C2H2 ZF 795 818

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action