Gfo_R004538 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R004538 T135710_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYNN
M08283_2.00 		Homo sapiens
GRCTYTTAWTTT
AAAWTAARAGYC		 ChIP-seq
Schmitges et al.(2016)
Q9NPC7_1-4.RCADE 		0.817 0.973
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R004538 C2H2 ZF 308 329
Gfo_R004538 C2H2 ZF 335 357
Gfo_R004538 C2H2 ZF 363 386
Gfo_R004538 C2H2 ZF 392 414
Gfo_R004538 C2H2 ZF 420 442
Gfo_R004538 C2H2 ZF 448 470
Gfo_R004538 C2H2 ZF 476 498
Gfo_R004538 C2H2 ZF 504 527

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action