Gfo_R006024 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R006024 T135728_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF10
M08246_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF10 		0.823 0.942
KLF10
M04489_2.00 		Homo sapiens
RMCACRCCCMYVHCACRCCCMC
GKGGGYGTGDBRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX 		0.823 0.942
KLF10
M08317_2.00 		Homo sapiens
SMCMCRCCCMYNBSN
NSVNRKGGGYGKGKS		 ChIP-seq
Schmitges et al.(2016)
Q13118.MEME 		0.823 0.942
KLF10
M10228_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TIEG1_Q6 		0.823 0.942
KLF10
M04490_2.00 		Homo sapiens
RMCACRCCCMYGMCACRCCCHC
GDGGGYGTGKCRKGGGYGTGKY		 SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX 		0.823 0.942
KLF11
M00242_2.00 		Homo sapiens
MCGCCCCC
GGGGGCGK		 PBM
Barrera et al.(2016)
KLF11_REF 		0.771 0.812
KLF11
M04554_2.00 		Homo sapiens
VMCMCRCCCMYNMCACGCCCMC
GKGGGCGTGKNRKGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX 		0.771 0.812
KLF11
M10261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FKLF_Q5 		0.771 0.812
KLF11
M00241_2.00 		Homo sapiens
MCGCCCMC
GKGGGCGK		 PBM
Barrera et al.(2016)
KLF11_R402Q 		0.771 0.812
KLF11
M04555_2.00 		Homo sapiens
VMCMCRCCCHYNHCACGCCCMC
GKGGGCGTGDNRDGGGYGKGKB		 SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX 		0.771 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006024 C2H2 ZF 346 370
Gfo_R006024 C2H2 ZF 376 400
Gfo_R006024 C2H2 ZF 406 428

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KLF10 Myotis lucifugus ENSMLUG00000012969 I 0.827
Myotis_brandtii_KLF10_10032162 Myotis brandtii Myotis_brandtii_KLF10_10032162 I 0.827
ENSFALG00000005917 Ficedula albicollis ENSFALG00000005917 I 0.827
KLF10 Cavia porcellus ENSCPOG00000011105 I 0.827
KLF10 Ornithorhynchus anatinus ENSOANG00000013800 I 0.823
ENSNLEG00000003646 Nomascus leucogenys ENSNLEG00000003646 I 0.823
ENSOARG00000017131 Ovis aries ENSOARG00000017131 I 0.823
KLF10 Ochotona princeps ENSOPRG00000006656 I 0.823
ENSPANG00000009227 Papio anubis ENSPANG00000009227 I 0.823
Klf10 Mus musculus ENSMUSG00000037465 I 0.823
KLF10 Oryctolagus cuniculus ENSOCUG00000016141 I 0.823
KLF10 Macaca mulatta ENSMMUG00000018815 I 0.823
KLF10 Loxodonta africana ENSLAFG00000000037 I 0.823
KLF10 Gorilla gorilla ENSGGOG00000015206 I 0.823
KLF10 Homo sapiens ENSG00000155090 D 0.823
ENSMEUG00000000662 Macropus eugenii ENSMEUG00000000662 I 0.823
ENSMICG00000002285 Microcebus murinus ENSMICG00000002285 I 0.823
KLF10 Monodelphis domestica ENSMODG00000005896 I 0.823
ENSPPYG00000018800 Pongo abelii ENSPPYG00000018800 I 0.823
ENSMPUG00000015132 Mustela putorius furo ENSMPUG00000015132 I 0.823
ENSPSIG00000012678 Pelodiscus sinensis ENSPSIG00000012678 I 0.823
Brh_R008046 Buceros rhinoceros Brh_R008046 I 0.823
Alligator_sinensis_CCG001309.1 Alligator sinensis Alligator_sinensis_CCG001309.1 I 0.823
Afo_R002224 Aptenodytes forsteri Afo_R002224 I 0.823
Cmyd_10010871 Chelonia mydas Cmyd_10010871 I 0.823
ENSBTAP00000019142-D1 Bos grunniens ENSBTAP00000019142-D1 I 0.823
Tal_R007530 Tyto alba Tal_R007530 I 0.823
ENSP00000285407 Macaca fascicularis ENSP00000285407 I 0.823
KLF10 Tursiops truncatus ENSTTRG00000000383 I 0.823
ENSTSYG00000003347 Tarsius syrichta ENSTSYG00000003347 I 0.823
Klf10 Rattus norvegicus ENSRNOG00000006118 I 0.823
KLF10 Pteropus vampyrus ENSPVAG00000013271 I 0.823
KLF10 Pan troglodytes ENSPTRG00000020484 I 0.823
ENSSHAG00000018290 Sarcophilus harrisii ENSSHAG00000018290 I 0.823
KLF10 Sus scrofa ENSSSCG00000027480 I 0.823
ENSSTOG00000027022 Ictidomys tridecemlineatus ENSSTOG00000027022 I 0.823
ENSSSCG00000027819 Sus scrofa ENSSSCG00000027819 I 0.823
KLF10 Felis catus ENSFCAG00000026958 I 0.823
KLF10 Otolemur garnettii ENSOGAG00000014528 I 0.823
KLF10 Dasypus novemcinctus ENSDNOG00000017020 I 0.823
ENSCSAG00000011934 Chlorocebus sabaeus ENSCSAG00000011934 I 0.823
KLF10 Echinops telfairi ENSETEG00000016283 I 0.823
ENSAMEG00000014775 Ailuropoda melanoleuca ENSAMEG00000014775 I 0.823
KLF10 Equus caballus ENSECAG00000013153 I 0.823
KLF10 Callithrix jacchus ENSCJAG00000016069 I 0.823
KLF10 Canis familiaris ENSCAFG00000000638 I 0.823
Klf10 Dipodomys ordii ENSDORG00000015269 I 0.823
KLF10 Bos taurus ENSBTAG00000014396 I 0.823
KLF10 Taeniopygia guttata ENSTGUG00000012120 I 0.820
ENSLACG00000013560 Latimeria chalumnae ENSLACG00000013560 I 0.819
KLF10 Meleagris gallopavo ENSMGAG00000012319 I 0.807
Pvit_03838 Pogona vitticeps Pvit_03838 I 0.807
KLF10 Erinaceus europaeus ENSEEUG00000009077 I 0.807
Aan_R003929 Calypte anna Aan_R003929 I 0.807
ENSAPLG00000004145 Anas platyrhynchos ENSAPLG00000004145 I 0.807
ENSGALG00000016063 Gallus gallus ENSGALG00000016063 I 0.807
ENSPFOG00000005130 Poecilia formosa ENSPFOG00000005130 I 0.803
KLF11 Sorex araneus ENSSARG00000004298 I 0.803
KLF10 Anolis carolinensis ENSACAG00000009177 I 0.803
Myotis_brandtii_KLF11_10020832 Myotis brandtii Myotis_brandtii_KLF11_10020832 I 0.803
Brh_R012523 Buceros rhinoceros Brh_R012523 I 0.803
ENSXMAG00000010947 Xiphophorus maculatus ENSXMAG00000010947 I 0.803
Ogr04283 Ophisaurus gracilis Ogr04283 I 0.803
klf10.S Xenopus laevis XB-GENE-866571 I 0.803
klf10 Xenopus tropicalis XB-GENE-854761 I 0.803
KLF11 Myotis lucifugus ENSMLUG00000002295 I 0.803
klf10.L Xenopus laevis XB-GENE-17335049 I 0.803
klf11.S Xenopus laevis XB-GENE-17345045 I 0.799
ENSLACG00000010260 Latimeria chalumnae ENSLACG00000010260 I 0.799
Afo_R015752 Aptenodytes forsteri Afo_R015752 I 0.799
ENSAPLG00000009146 Anas platyrhynchos ENSAPLG00000009146 I 0.799
klf11.L Xenopus laevis XB-GENE-956865 I 0.799
klf11 Xenopus tropicalis XB-GENE-956858 I 0.799
Alligator_sinensis_CCG017491.1 Alligator sinensis Alligator_sinensis_CCG017491.1 I 0.799
KLF11 Gallus gallus ENSGALG00000016440 I 0.799
Aan_R015392 Calypte anna Aan_R015392 I 0.799
Tal_R013154 Tyto alba Tal_R013154 I 0.799
KLF11 Meleagris gallopavo ENSMGAG00000014008 I 0.799
ENSLOCG00000016837 Lepisosteus oculatus ENSLOCG00000016837 I 0.796
KLF11 Gasterosteus aculeatus ENSGACG00000008836 I 0.787
KLF11 Tupaia belangeri ENSTBEG00000008268 I 0.787
ENSDORG00000012974 Dipodomys ordii ENSDORG00000012974 I 0.787
ENSFALG00000006648 Ficedula albicollis ENSFALG00000006648 I 0.787
KLF11 Equus caballus ENSECAG00000015820 I 0.787
KLF11 Erinaceus europaeus ENSEEUG00000006894 I 0.787
KLF11 Anolis carolinensis ENSACAG00000000128 I 0.787
KLF11 Takifugu rubripes ENSTRUG00000013598 I 0.787
Pvit_14441 Pogona vitticeps Pvit_14441 I 0.787
KLF11 Echinops telfairi ENSETEG00000002915 I 0.787
KLF11 Otolemur garnettii ENSOGAG00000026035 I 0.787
ENSONIG00000003704 Oreochromis niloticus ENSONIG00000003704 I 0.787
ENSOARG00000015319 Ovis aries ENSOARG00000015319 I 0.787
ENSNLEG00000013701 Nomascus leucogenys ENSNLEG00000013701 I 0.787
KLF11 Oryzias latipes ENSORLG00000015191 I 0.787
ENSCING00000006082 Ciona intestinalis ENSCING00000006082 I 0.784
NEMVEDRAFT_v1g39461 Nematostella vectensis NEMVEDRAFT_v1g39461 I 0.783
ENSPSIG00000010816 Pelodiscus sinensis ENSPSIG00000010816 I 0.783
ENSAMXG00000004794 Astyanax mexicanus ENSAMXG00000004794 I 0.783
ENSAMXG00000011768 Astyanax mexicanus ENSAMXG00000011768 I 0.783
KLF10 Takifugu rubripes ENSTRUG00000010298 I 0.783
KLF11 Taeniopygia guttata ENSTGUG00000013041 I 0.783
SPU_026418 Strongylocentrotus purpuratus SPU_026418 I 0.783
ENSMPUG00000013287 Mustela putorius furo ENSMPUG00000013287 I 0.783
ENSGMOG00000011144 Gadus morhua ENSGMOG00000011144 I 0.783
klf11a Danio rerio ENSDARG00000030844 I 0.783
klf11b Danio rerio ENSDARG00000013794 I 0.783
KLF11 Canis familiaris ENSCAFG00000003405 I 0.783
KLF11 Tetraodon nigroviridis ENSTNIG00000000881 I 0.780
KLF11 Takifugu rubripes ENSTRUG00000008202 I 0.780
ENSGMOG00000003463 Gadus morhua ENSGMOG00000003463 I 0.780
ENSXMAG00000009885 Xiphophorus maculatus ENSXMAG00000009885 I 0.780
ENSONIG00000018808 Oreochromis niloticus ENSONIG00000018808 I 0.780
ENSPFOG00000015744 Poecilia formosa ENSPFOG00000015744 I 0.780
KLF11 Oryzias latipes ENSORLG00000018102 I 0.780
KLF11 Gasterosteus aculeatus ENSGACG00000001487 I 0.780
Sakowv30032823m.g Saccoglossus kowalevskii Sakowv30032823m.g I 0.779
Gfo_R015265 Geospiza fortis Gfo_R015265 I 0.777
PHUM248360 Pediculus humanus PHUM248360 I 0.774
KLF11 Dasypus novemcinctus ENSDNOG00000035689 I 0.771
KLF11 Ornithorhynchus anatinus ENSOANG00000007790 I 0.771
KLF11 Oryctolagus cuniculus ENSOCUG00000003809 I 0.771
KLF11 Felis catus ENSFCAG00000030965 I 0.771
DAPPUDRAFT_312628 Daphnia pulex DAPPUDRAFT_312628 I 0.771
ENSP00000307023 Macaca fascicularis ENSP00000307023 I 0.771
KLF11 Monodelphis domestica ENSMODG00000014758 I 0.771
KLF11 Macaca mulatta ENSMMUG00000002054 I 0.771
KLF11 Homo sapiens ENSG00000172059 D 0.771
Klf11 Mus musculus ENSMUSG00000020653 I 0.771
ENSP00000307023-D1 Bos grunniens ENSP00000307023-D1 I 0.771
KLF11 Pan troglodytes ENSPTRG00000011645 I 0.771
ENSPPYG00000012659 Pongo abelii ENSPPYG00000012659 I 0.771
KLF11 Bos taurus ENSBTAG00000046218 I 0.771
KLF11 Loxodonta africana ENSLAFG00000032182 I 0.771
KLF11 Tursiops truncatus ENSTTRG00000017207 I 0.771
ENSSTOG00000002442 Ictidomys tridecemlineatus ENSSTOG00000002442 I 0.771
KLF11 Procavia capensis ENSPCAG00000011366 I 0.771
ENSSHAG00000005846 Sarcophilus harrisii ENSSHAG00000005846 I 0.771
ENSCSAG00000007163 Chlorocebus sabaeus ENSCSAG00000007163 I 0.771
ENSPANG00000008644 Papio anubis ENSPANG00000008644 I 0.771
ENSONIG00000016428 Oreochromis niloticus ENSONIG00000016428 I 0.771
KLF11 Gorilla gorilla ENSGGOG00000012494 I 0.771
Klf11 Rattus norvegicus ENSRNOG00000054259 I 0.771
KLF11 Ochotona princeps ENSOPRG00000013425 I 0.771
ENSCSAVG00000009024 Ciona savignyi ENSCSAVG00000009024 I 0.768
ENSPMAG00000001515 Petromyzon marinus ENSPMAG00000001515 I 0.768
estExt_fgenesh2_pg.C_5760011 Branchiostoma floridae estExt_fgenesh2_pg.C_5760011 I 0.767
ENSAMEG00000011355 Ailuropoda melanoleuca ENSAMEG00000011355 I 0.767
KLF10 Gasterosteus aculeatus ENSGACG00000004632 I 0.767
Aqu1.219264 Amphimedon queenslandica Aqu1.219264 I 0.762
GB45040 Apis mellifera GB45040 I 0.760
SINV19724 Solenopsis invicta SINV19724 I 0.757
NV23733 Nasonia vitripennis NV23733 I 0.757
KLF11 Pteropus vampyrus ENSPVAG00000017463 I 0.757
ACEP10867 Atta cephalotes ACEP10867 I 0.757
CapteG131091 Capitella teleta CapteG131091 I 0.757
KLF11 Cavia porcellus ENSCPOG00000025767 I 0.756
TC000837 Tribolium castaneum TC000837 I 0.756
ACEP25218 Atta cephalotes ACEP25218 I 0.756