Gfo_R006486 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R006486 T135742_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006486 C2H2 ZF 120 142
Gfo_R006486 C2H2 ZF 151 173
Gfo_R006486 C2H2 ZF 179 201
Gfo_R006486 C2H2 ZF 696 718
Gfo_R006486 C2H2 ZF 724 746
Gfo_R006486 C2H2 ZF 752 775
Gfo_R006486 C2H2 ZF 806 828
Gfo_R006486 C2H2 ZF 837 860
Gfo_R006486 C2H2 ZF 1492 1514
Gfo_R006486 C2H2 ZF 1520 1542

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R012638 Calypte anna Aan_R012638 N 0.827
Afo_R014721 Aptenodytes forsteri Afo_R014721 N 0.827
ENSAMEG00000017412 Ailuropoda melanoleuca ENSAMEG00000017412 I 0.817
ENSAPLG00000004726 Anas platyrhynchos ENSAPLG00000004726 N 0.827
ENSFALG00000013231 Ficedula albicollis ENSFALG00000013231 N 0.822
ENSPSIG00000006582 Pelodiscus sinensis ENSPSIG00000006582 N 0.826
ENSSHAG00000005295 Sarcophilus harrisii ENSSHAG00000005295 N 0.822
Myotis_brandtii_RREB1_10008109 Myotis brandtii Myotis_brandtii_RREB1_10008109 N 0.814
RREB1 Loxodonta africana ENSLAFG00000005300 I 0.813
RREB1 Canis familiaris ENSCAFG00000009527 I 0.817
RREB1 Cavia porcellus ENSCPOG00000014380 N 0.815
RREB1 Taeniopygia guttata ENSTGUG00000002309 N 0.827
RREB1 Equus caballus ENSECAG00000018169 N 0.813
Rreb1 Rattus norvegicus ENSRNOG00000015701 I 0.819
RREB1 Homo sapiens ENSG00000124782 D 0.819
RREB1 Ochotona princeps ENSOPRG00000001966 N 0.810
RREB1 Otolemur garnettii ENSOGAG00000025755 N 0.819
RREB1 Macaca mulatta ENSMMUG00000007852 I 0.819
RREB1 Gallus gallus ENSGALG00000012799 N 0.827
RREB1 Meleagris gallopavo ENSMGAG00000003910 N 0.827
RREB1 Myotis lucifugus ENSMLUG00000013153 N 0.814