Gfo_R006486 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R006486 T135742_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006486 C2H2 ZF 120 142
Gfo_R006486 C2H2 ZF 151 173
Gfo_R006486 C2H2 ZF 179 201
Gfo_R006486 C2H2 ZF 696 718
Gfo_R006486 C2H2 ZF 724 746
Gfo_R006486 C2H2 ZF 752 775
Gfo_R006486 C2H2 ZF 806 828
Gfo_R006486 C2H2 ZF 837 860
Gfo_R006486 C2H2 ZF 1492 1514
Gfo_R006486 C2H2 ZF 1520 1542

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000017412 Ailuropoda melanoleuca ENSAMEG00000017412 I 0.817
ENSAPLG00000004726 Anas platyrhynchos ENSAPLG00000004726 N 0.827
Afo_R014721 Aptenodytes forsteri Afo_R014721 N 0.827
Aan_R012638 Calypte anna Aan_R012638 N 0.827
RREB1 Canis familiaris ENSCAFG00000009527 I 0.817
RREB1 Cavia porcellus ENSCPOG00000014380 N 0.815
RREB1 Equus caballus ENSECAG00000018169 N 0.813
ENSFALG00000013231 Ficedula albicollis ENSFALG00000013231 N 0.822
RREB1 Gallus gallus ENSGALG00000012799 N 0.827
RREB1 Homo sapiens ENSG00000124782 D 0.819
RREB1 Loxodonta africana ENSLAFG00000005300 I 0.813
RREB1 Macaca mulatta ENSMMUG00000007852 I 0.819
RREB1 Meleagris gallopavo ENSMGAG00000003910 N 0.827
Myotis_brandtii_RREB1_10008109 Myotis brandtii Myotis_brandtii_RREB1_10008109 N 0.814
RREB1 Myotis lucifugus ENSMLUG00000013153 N 0.814
RREB1 Ochotona princeps ENSOPRG00000001966 N 0.810
RREB1 Otolemur garnettii ENSOGAG00000025755 N 0.819
ENSPSIG00000006582 Pelodiscus sinensis ENSPSIG00000006582 N 0.826
Rreb1 Rattus norvegicus ENSRNOG00000015701 I 0.819
ENSSHAG00000005295 Sarcophilus harrisii ENSSHAG00000005295 N 0.822
RREB1 Taeniopygia guttata ENSTGUG00000002309 N 0.827