CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R006641
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R006641
T135744_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R006641
C2H2 ZF
363
385
LQCPKCDKKFDRIGKYESHTRVH
Gfo_R006641
C2H2 ZF
391
413
FECDICHQRYSTKSNLTVHRKKH
Gfo_R006641
C2H2 ZF
471
493
WKCDICKKSFTRRPHLEEHMILH
Gfo_R006641
C2H2 ZF
499
522
FKCTYCEEHFKSRFARLKHQEKFH
Gfo_R006641
C2H2 ZF
526
546
FPCDICGRQFNDTGNLKRHIE
Gfo_R006641
C2H2 ZF
555
577
WTCFICGKSVRERTTLKEHLRIH
Gfo_R006641
C2H2 ZF
583
606
HLCSICGQSFRHGSSYRLHLRVHH
Gfo_R006641
C2H2 ZF
611
633
YECEECGKTFIRHDHLTKHKKIH
Gfo_R006641
C2H2 ZF
639
662
HQCEECGKCFGRRDHLTVHYKSVH
Gfo_R006641
C2H2 ZF
676
698
HQCEVCKKVFKGKSSLEMHFRTH
Gfo_R006641
C2H2 ZF
704
726
YKCQICNQSFRIKKTLTKHMVIH
Gfo_R006641
C2H2 ZF
732
755
FNCQHCNATFKRKDKLKYHIDHVH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy