Gfo_R006806 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R006806 T135749_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zbtb1
M00775_2.00 		Mus musculus
NHMMCGCRHN
NDYGCGKKDN		 PBM
Weirauch et al.(2013)
pTH2366 		0.821 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006806 C2H2 ZF 532 553
Gfo_R006806 C2H2 ZF 572 598
Gfo_R006806 C2H2 ZF 604 626
Gfo_R006806 C2H2 ZF 660 682
Gfo_R006806 C2H2 ZF 684 707

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action