CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R007895
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R007895
T135760_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R007895
C2H2 ZF
372
391
CQCGKSFTYKSQRDRHMSMH
Gfo_R007895
C2H2 ZF
397
419
YGCGVCDKKFKMKHHLVGHMKIH
Gfo_R007895
C2H2 ZF
425
446
YECNICGKRFMWRDSFHRHVTS
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG016227.1
Alligator sinensis
Alligator_sinensis_CCG016227.1
N
0.823
Afo_R003404
Aptenodytes forsteri
Afo_R003404
N
0.823
ZBTB43
Taeniopygia guttata
ENSTGUG00000007422
N
0.823
Brh_R009981
Buceros rhinoceros
Brh_R009981
N
0.823
Cmyd_10017108
Chelonia mydas
Cmyd_10017108
N
0.823
zbtb43
Xenopus tropicalis
XB-GENE-5880504
N
0.823
Tal_R010894
Tyto alba
Tal_R010894
N
0.823
ENSPSIG00000005064
Pelodiscus sinensis
ENSPSIG00000005064
N
0.823
ZBTB43
Ornithorhynchus anatinus
ENSOANG00000014742
N
0.823
ENSCPOG00000000874
Cavia porcellus
ENSCPOG00000000874
N
0.823
ENSAPLG00000001308
Anas platyrhynchos
ENSAPLG00000001308
N
0.823
ZBTB43
Gallus gallus
ENSGALG00000000934
N
0.823
ENSFALG00000014344
Ficedula albicollis
ENSFALG00000014344
N
0.823
ZBTB43
Monodelphis domestica
ENSMODG00000019790
N
0.823
ZBTB43
Meleagris gallopavo
ENSMGAG00000008586
N
0.823
ZBTB43
Anolis carolinensis
ENSACAG00000004731
N
0.816
Pvit_11037
Pogona vitticeps
Pvit_11037
N
0.816
ENSAMXG00000024865
Astyanax mexicanus
ENSAMXG00000024865
N
0.789
zbtb43
Danio rerio
ENSDARG00000045983
N
0.786