CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gfo_R007918
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R007918
T135762_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB6
M08364_2.00
Homo sapiens
SBNGCTCCAKVDYCN
NGRHBMTGGAGCNVS
ChIP-seq
Schmitges et al.(2016)
Q15916.MEME
0.807
0.967
ZBTB6
M08940_2.00
Homo sapiens
NRGCTCCAKCDYC
GRHGMTGGAGCYN
Misc
Kulakovskiy et al.(2013)
ZBTB6_HUMAN.H11MO.0.C
0.807
0.967
ZBTB6
M10307_2.00
Homo sapiens
BGGCTCYAKSRYC
GRYSMTRGAGCCV
Transfac
Matys et al.(2006)
V$ZID_01
0.807
0.967
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R007918
C2H2 ZF
308
330
HQCPKCPRGFLHLENYLRHLKMH
Gfo_R007918
C2H2 ZF
333
355
FLCLQCGKTFTQKKNLNRHIRGH
Gfo_R007918
C2H2 ZF
361
383
FQCMVCLKTFTAKSTLQDHLNIH
Gfo_R007918
C2H2 ZF
389
412
YKCHCCDMDFKHKSALKKHLTSVH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy