CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R008908
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R008908
T135791_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R008908
C2H2 ZF
344
366
YSCNYCAKSFNDRVLLTAHLQLH
Gfo_R008908
C2H2 ZF
373
404
FICKYCSKQFANLNILESHEQVCMRSSNLSAH
Gfo_R008908
C2H2 ZF
464
486
YTCVVCKRSYVTLSSLRRHANVH
Gfo_R008908
C2H2 ZF
492
514
YPCHYCNKVFALAEYRTRHEIWH
Gfo_R008908
C2H2 ZF
1008
1030
YICELCQKQFQSPSTLKMHMRCH
Gfo_R008908
C2H2 ZF
1036
1058
YTCKTCGKCFSVPGNLQKHERIH
Gfo_R008908
C2H2 ZF
1064
1086
FVCQYCNKAFTLNETLKIHERIH
Gfo_R008908
C2H2 ZF
1123
1145
YACFQCPKICKTAAALGMHQKKH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBTB38
Taeniopygia guttata
ENSTGUG00000008376
N
0.827