Gfo_R012611 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R012611 T135846_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF521
M10318_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZNF521_03 		0.778 0.949
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R012611 C2H2 ZF 107 129
Gfo_R012611 C2H2 ZF 135 157
Gfo_R012611 C2H2 ZF 163 185
Gfo_R012611 C2H2 ZF 191 213
Gfo_R012611 C2H2 ZF 235 258
Gfo_R012611 C2H2 ZF 270 293
Gfo_R012611 C2H2 ZF 300 321
Gfo_R012611 C2H2 ZF 426 449
Gfo_R012611 C2H2 ZF 466 489
Gfo_R012611 C2H2 ZF 502 525
Gfo_R012611 C2H2 ZF 549 574
Gfo_R012611 C2H2 ZF 623 645
Gfo_R012611 C2H2 ZF 653 675
Gfo_R012611 C2H2 ZF 683 706
Gfo_R012611 C2H2 ZF 711 734
Gfo_R012611 C2H2 ZF 741 764
Gfo_R012611 C2H2 ZF 798 821
Gfo_R012611 C2H2 ZF 875 898
Gfo_R012611 C2H2 ZF 919 941
Gfo_R012611 C2H2 ZF 948 970
Gfo_R012611 C2H2 ZF 1214 1236
Gfo_R012611 C2H2 ZF 1245 1268

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R005912 Aptenodytes forsteri Afo_R005912 I 0.827
ZNF521 Tursiops truncatus ENSTTRG00000005318 I 0.824
ENSTSYG00000005246 Tarsius syrichta ENSTSYG00000005246 I 0.813
Zfp521 Rattus norvegicus ENSRNOG00000016874 I 0.800
ENSFALG00000006065 Ficedula albicollis ENSFALG00000006065 I 0.791
ENSBTAP00000045301-D1 Bos grunniens ENSBTAP00000045301-D1 I 0.786
ZNF521 Bos taurus ENSBTAG00000007383 I 0.786
ZNF521 Oryctolagus cuniculus ENSOCUG00000005774 I 0.780
ZNF521 Monodelphis domestica ENSMODG00000021509 I 0.779
ENSSTOG00000012398 Ictidomys tridecemlineatus ENSSTOG00000012398 I 0.778
ZNF521 Sorex araneus ENSSARG00000008323 I 0.778
ENSPPYG00000009074 Pongo abelii ENSPPYG00000009074 I 0.778
ENSPSIG00000002538 Pelodiscus sinensis ENSPSIG00000002538 I 0.778
ZNF521 Pan troglodytes ENSPTRG00000022783 I 0.778
ZNF521 Otolemur garnettii ENSOGAG00000007195 I 0.778
ZNF521 Microcebus murinus ENSMICG00000006267 I 0.778
ENSCSAG00000017805 Chlorocebus sabaeus ENSCSAG00000017805 I 0.778
ZNF521 Cavia porcellus ENSCPOG00000015173 I 0.778
ZNF521 Callithrix jacchus ENSCJAG00000020691 I 0.778
ENSMMUP00000028000 Macaca fascicularis ENSMMUP00000028000 I 0.778
ZNF521 Homo sapiens ENSG00000198795 D 0.778
ENSNLEG00000006568 Nomascus leucogenys ENSNLEG00000006568 I 0.778
ZNF521 Gorilla gorilla ENSGGOG00000027325 I 0.778
ZNF521 Loxodonta africana ENSLAFG00000013445 I 0.776
Zfp521 Mus musculus ENSMUSG00000024420 I 0.774
ZNF521 Dasypus novemcinctus ENSDNOG00000040834 I 0.769
ZNF521 Erinaceus europaeus ENSEEUG00000006860 I 0.768
ZNF521 Macaca mulatta ENSMMUG00000008600 I 0.768
ZNF521 Anolis carolinensis ENSACAG00000001799 I 0.768