Gfo_R013938 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R013938 T135858_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R013938 C2H2 ZF 139 162
Gfo_R013938 C2H2 ZF 171 192
Gfo_R013938 C2H2 ZF 206 226
Gfo_R013938 C2H2 ZF 234 259
Gfo_R013938 C2H2 ZF 267 289
Gfo_R013938 C2H2 ZF 292 314
Gfo_R013938 C2H2 ZF 320 342
Gfo_R013938 C2H2 ZF 348 370
Gfo_R013938 C2H2 ZF 376 398
Gfo_R013938 C2H2 ZF 404 427
Gfo_R013938 C2H2 ZF 433 455
Gfo_R013938 C2H2 ZF 462 483
Gfo_R013938 C2H2 ZF 489 511
Gfo_R013938 C2H2 ZF 517 539
Gfo_R013938 C2H2 ZF 545 567
Gfo_R013938 C2H2 ZF 575 597

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRDM5 Taeniopygia guttata ENSTGUG00000001920 N 0.826
Brh_R013301 Buceros rhinoceros Brh_R013301 N 0.824
ENSLACG00000009187 Latimeria chalumnae ENSLACG00000009187 N 0.819
Afo_R008783 Aptenodytes forsteri Afo_R008783 N 0.813
ENSAPLG00000013828 Anas platyrhynchos ENSAPLG00000013828 N 0.812
PRDM5 Anolis carolinensis ENSACAG00000012999 N 0.810
ENSPSIG00000013505 Pelodiscus sinensis ENSPSIG00000013505 N 0.810
PRDM5 Meleagris gallopavo ENSMGAG00000010710 N 0.806
Aan_R014124 Calypte anna Aan_R014124 N 0.802
PRDM5 Monodelphis domestica ENSMODG00000018942 N 0.765