Gfo_R014333 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R014333 T135860_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB49
M02901_2.00 		Homo sapiens
TTYYGCYTGRCVBGTCA
TGACVBGYCARGCRRAA		 SELEX
Jolma et al.(2013)
ZBTB49_1 		0.819 0.969
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R014333 C2H2 ZF 394 416
Gfo_R014333 C2H2 ZF 422 444
Gfo_R014333 C2H2 ZF 450 472
Gfo_R014333 C2H2 ZF 478 500
Gfo_R014333 C2H2 ZF 506 528
Gfo_R014333 C2H2 ZF 534 556
Gfo_R014333 C2H2 ZF 562 584

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB49 Taeniopygia guttata ENSTGUG00000009920 I 0.827
Afo_R000623 Aptenodytes forsteri Afo_R000623 I 0.827
ENSPSIG00000015554 Pelodiscus sinensis ENSPSIG00000015554 I 0.827
Aan_R008590 Calypte anna Aan_R008590 I 0.827
ZBTB49 Gallus gallus ENSGALG00000015009 I 0.827
ZBTB49 Meleagris gallopavo ENSMGAG00000012706 I 0.827
ENSAPLG00000003489 Anas platyrhynchos ENSAPLG00000003489 I 0.827
ZBTB49 Canis familiaris ENSCAFG00000015688 I 0.825
ENSAMEG00000013670 Ailuropoda melanoleuca ENSAMEG00000013670 I 0.825
Brh_R008967 Buceros rhinoceros Brh_R008967 I 0.823
ENSMICG00000000204 Microcebus murinus ENSMICG00000000204 I 0.819
ENSNLEG00000016142 Nomascus leucogenys ENSNLEG00000016142 I 0.819
ENSPPYG00000014601 Pongo abelii ENSPPYG00000014601 I 0.819
ZBTB49 Pan troglodytes ENSPTRG00000015868 I 0.819
ENSPANG00000015665 Papio anubis ENSPANG00000015665 I 0.819
ZBTB49 Macaca mulatta ENSMMUG00000023394 I 0.819
ZBTB49 Equus caballus ENSECAG00000013694 I 0.819
ZBTB49 Homo sapiens ENSG00000168826 D 0.819
ZBTB49 Callithrix jacchus ENSCJAG00000000119 I 0.819
ENSCSAG00000016270 Chlorocebus sabaeus ENSCSAG00000016270 I 0.819
ZBTB49 Gorilla gorilla ENSGGOG00000013012 I 0.819
ENSFALG00000009426 Ficedula albicollis ENSFALG00000009426 I 0.817
ZBTB49 Dasypus novemcinctus ENSDNOG00000016261 I 0.817
ENSTBEG00000005000 Tupaia belangeri ENSTBEG00000005000 I 0.816
ZBTB49 Loxodonta africana ENSLAFG00000016590 I 0.815
ZBTB49 Sus scrofa ENSSSCG00000008728 I 0.814
ENSP00000338807-D1 Bos grunniens ENSP00000338807-D1 I 0.814
ZBTB49 Oryctolagus cuniculus ENSOCUG00000007993 I 0.814
ZBTB49 Bos taurus ENSBTAG00000014680 I 0.814
ZBTB49 Pteropus vampyrus ENSPVAG00000015185 I 0.813
ENSOARG00000007577 Ovis aries ENSOARG00000007577 I 0.813
ENSSTOG00000000550 Ictidomys tridecemlineatus ENSSTOG00000000550 I 0.812
ZBTB49 Otolemur garnettii ENSOGAG00000000988 I 0.812
ZBTB49 Cavia porcellus ENSCPOG00000007981 I 0.811
ENSLACG00000007886 Latimeria chalumnae ENSLACG00000007886 I 0.804
Zbtb49 Rattus norvegicus ENSRNOG00000005633 I 0.803
Zbtb49 Mus musculus ENSMUSG00000029127 I 0.803
ZBTB49 Anolis carolinensis ENSACAG00000010957 I 0.796
ZBTB49 Monodelphis domestica ENSMODG00000001516 I 0.789
ENSSHAG00000008414 Sarcophilus harrisii ENSSHAG00000008414 I 0.785
ZBTB49 Myotis lucifugus ENSMLUG00000009904 I 0.784
Myotis_brandtii_ZBTB49_10013405 Myotis brandtii Myotis_brandtii_ZBTB49_10013405 I 0.784
Pvit_18935 Pogona vitticeps Pvit_18935 I 0.781
ZBTB49 Felis catus ENSFCAG00000015510 I 0.778
ENSLOCG00000009974 Lepisosteus oculatus ENSLOCG00000009974 I 0.777