Gfo_R014333 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R014333 T135860_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB49
M02901_2.00 		Homo sapiens
TTYYGCYTGRCVBGTCA
TGACVBGYCARGCRRAA		 SELEX
Jolma et al.(2013)
ZBTB49_1 		0.819 0.969
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R014333 C2H2 ZF 394 416
Gfo_R014333 C2H2 ZF 422 444
Gfo_R014333 C2H2 ZF 450 472
Gfo_R014333 C2H2 ZF 478 500
Gfo_R014333 C2H2 ZF 506 528
Gfo_R014333 C2H2 ZF 534 556
Gfo_R014333 C2H2 ZF 562 584

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

Invalid Input OrderBy

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action