CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hsal_07497--XP_623760.2_APIME
(
Harpegnathos saltator
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Hsal_07497--XP_623760.2_APIME
T135967_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ken
M06111_2.00
Drosophila melanogaster
ACTTTCWCY
RGWGAAAGT
B1H
Zhu et al.(2011)
ken_SANGER_10_FBgn0011236
0.770
0.870
ken
M06112_2.00
Drosophila melanogaster
NNRCTTTCWCYNNNN
NNNNRGWGAAAGYNN
B1H
Zhu et al.(2011)
ken_SOLEXA_5_FBgn0011236
0.770
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hsal_07497--XP_623760.2_APIME
C2H2 ZF
382
404
YRCTYCGKQFGMSWNLKTHLRVH
Hsal_07497--XP_623760.2_APIME
C2H2 ZF
410
433
FACRICVAMFKQKAHLLKHLCSVH
Hsal_07497--XP_623760.2_APIME
C2H2 ZF
444
467
FTCCFCSLSFDSLQELIRHLSGPH
Links
Other
C2H2 ZF
family TFs
Other
Harpegnathos saltator
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy