CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Myotis_brandtii_GFI1B_10010118
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_GFI1B_10010118
T136027_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gfi1b
M08098_2.00
Mus musculus
MAATCWCWGCH
DGCWGWGATTK
ChIP-seq
Mathelier et al.(2014)
MA0483.1
0.799
0.947
Gfi1b
M08977_2.00
Mus musculus
MAAYCACWGH
DCWGWGRTTK
Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A
0.799
0.947
Gfi1b
M09514_2.00
Mus musculus
MAATCWSWGC
GCWSWGATTK
Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178
0.799
0.947
GFI1B
M00240_2.00
Homo sapiens
NNAAATCWSDN
NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_REF
0.797
0.939
GFI1B
M04523_2.00
Homo sapiens
NMAATCASDGCNNBBCACTNN
NNAGTGVVNNGCHSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX
0.797
0.939
GFI1B
M08909_2.00
Homo sapiens
MAATCWSDGY
RCHSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A
0.797
0.939
GFI1B
M10243_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_01
0.797
0.939
GFI1B
M10244_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_Q6
0.797
0.939
GFI1B
M00239_2.00
Homo sapiens
NNAAATCWSDN
NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_A204T
0.797
0.939
GFI1B
M04524_2.00
Homo sapiens
NMAATCASWGCDNNBCACTHN
NDAGTGVNNHGCWSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX
0.797
0.939
sens-2
M06165_2.00
Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY
B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632
0.775
0.826
GFI1
M00238_2.00
Homo sapiens
NWAWMNNNN
NNNNKWTWN
PBM
Barrera et al.(2016)
GFI1_REF
0.764
0.856
GFI1
M04507_2.00
Homo sapiens
BMAATCACDGCNHBBCACTMN
NKAGTGVVDNGCHGTGATTKV
SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX
0.764
0.856
Gfi1
M02668_2.00
Rattus norvegicus
NMAATCWVHS
SDBWGATTKN
SELEX
Mathelier et al.(2014)
MA0038.1
0.764
0.856
GFI1
M08905_2.00
Homo sapiens
MAATCWSWGY
RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C
0.764
0.856
Gfi1
M08984_2.00
Mus musculus
MAATCWSWGY
RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C
0.764
0.856
GFI1
M10235_2.00
Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN
NNNVNNHAAATCWSDGYNNNNNNN
Transfac
Matys et al.(2006)
V$GFI1_01
0.764
0.856
GFI1
M10236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1_Q6_01
0.764
0.856
GFI1
M04508_2.00
Homo sapiens
NNAGTGVVNHGCWSTGATTKV
BMAATCASWGCDNBBCACTNN
SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX
0.764
0.856
GFI1
M00236_2.00
Homo sapiens
NAATMNNNN
NNNNKATTN
PBM
Barrera et al.(2016)
GFI1_L400F
0.762
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_GFI1B_10010118
C2H2 ZF
252
269
TQVFSTPHGLEVHARRSH
Myotis_brandtii_GFI1B_10010118
C2H2 ZF
275
297
FACDVCGKTFGHVVSLEQHTHIH
Myotis_brandtii_GFI1B_10010118
C2H2 ZF
303
325
FECQMCGKAFKRSSTLSTHLLIH
Myotis_brandtii_GFI1B_10010118
C2H2 ZF
331
353
YPCQFCGKRFHQKSDMKKHTYIH
Myotis_brandtii_GFI1B_10010118
C2H2 ZF
359
381
HKCQVCGKAFSQSSNLITHSRKH
Myotis_brandtii_GFI1B_10010118
C2H2 ZF
387
410
FSCELCAKGFQRKVDLRRHRESQH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GFI1B
Myotis lucifugus
ENSMLUG00000006673
I
0.814
GFI1B
Dasypus novemcinctus
ENSDNOG00000036528
I
0.799
ENSP00000361195
Macaca fascicularis
ENSP00000361195
I
0.799
ENSCSAG00000015008
Chlorocebus sabaeus
ENSCSAG00000015008
I
0.799
GFI1B
Equus caballus
ENSECAG00000008127
I
0.799
GFI1B
Canis familiaris
ENSCAFG00000019877
I
0.799
ENSPANG00000024216
Papio anubis
ENSPANG00000024216
I
0.799
Gfi1b
Mus musculus
ENSMUSG00000026815
D
0.799
ENSMPUG00000012489
Mustela putorius furo
ENSMPUG00000012489
I
0.799
GFI1B
Macaca mulatta
ENSMMUG00000005948
I
0.799
GFI1B
Felis catus
ENSFCAG00000027147
I
0.797
GFI1B
Sus scrofa
ENSSSCG00000005737
I
0.797
ENSNLEG00000012963
Nomascus leucogenys
ENSNLEG00000012963
I
0.797
Gfi1b
Rattus norvegicus
ENSRNOG00000011353
I
0.797
GFI1B
Pan troglodytes
ENSPTRG00000021505
I
0.797
GFI1B
Gorilla gorilla
ENSGGOG00000015828
I
0.797
ENSBTAP00000016974-D1
Bos grunniens
ENSBTAP00000016974-D1
I
0.797
ENSPPYG00000019718
Pongo abelii
ENSPPYG00000019718
I
0.797
GFI1B
Oryctolagus cuniculus
ENSOCUG00000001793
I
0.797
GFI1B
Homo sapiens
ENSG00000165702
D
0.797
GFI1B
Bos taurus
ENSBTAG00000012772
I
0.797
GFI1B
Callithrix jacchus
ENSCJAG00000018071
I
0.797
ENSSTOG00000022285
Ictidomys tridecemlineatus
ENSSTOG00000022285
I
0.796
GFI1B
Monodelphis domestica
ENSMODG00000012600
I
0.796
GFI1B
Loxodonta africana
ENSLAFG00000022367
I
0.796
ENSPSIG00000012112
Pelodiscus sinensis
ENSPSIG00000012112
I
0.793
ENSLACG00000012207
Latimeria chalumnae
ENSLACG00000012207
I
0.793
GFI1B
Meleagris gallopavo
ENSMGAG00000006129
I
0.792
Tal_R001363
Tyto alba
Tal_R001363
I
0.792
ENSAPLG00000003373
Anas platyrhynchos
ENSAPLG00000003373
I
0.792
Afo_R001655
Aptenodytes forsteri
Afo_R001655
I
0.792
Aan_R008865
Calypte anna
Aan_R008865
I
0.792
Gfo_R007994
Geospiza fortis
Gfo_R007994
I
0.792
ENSFALG00000001479
Ficedula albicollis
ENSFALG00000001479
I
0.792
GFI1B
Gallus gallus
ENSGALG00000003478
I
0.792
Gfi1b
Dipodomys ordii
ENSDORG00000000342
I
0.791
Cmyd_10017172
Chelonia mydas
Cmyd_10017172
I
0.790
GFI1B
Cavia porcellus
ENSCPOG00000026928
I
0.789
GFI1B
Procavia capensis
ENSPCAG00000012329
I
0.789
GFI1B
Otolemur garnettii
ENSOGAG00000008879
I
0.789
GFI1B
Ornithorhynchus anatinus
ENSOANG00000014723
I
0.785
NEMVEDRAFT_v1g182742
Nematostella vectensis
NEMVEDRAFT_v1g182742
I
0.780
ENSBTAP00000022231-D1
Bos grunniens
ENSBTAP00000022231-D1
I
0.777
ENSP00000399719
Macaca fascicularis
ENSP00000399719
I
0.777
GA16348
Drosophila pseudoobscura
FBgn0076363
I
0.775
GF15430
Drosophila ananassae
FBgn0092455
I
0.775
MDOA011065
Musca domestica
MDOA011065
I
0.775
GG10437
Drosophila erecta
FBgn0102746
I
0.775
GE14143
Drosophila yakuba
FBgn0231766
I
0.775
GM16223
Drosophila sechellia
FBgn0171139
I
0.775
GK24242
Drosophila willistoni
FBgn0226203
I
0.775
GH13715
Drosophila grimshawi
FBgn0121191
I
0.775
GI23984
Drosophila mojavensis
FBgn0146708
I
0.775
GJ21268
Drosophila virilis
FBgn0208401
I
0.775
GL26188
Drosophila persimilis
FBgn0163770
I
0.775
sens-2
Drosophila melanogaster
FBgn0051632
D
0.775
ENSGMOG00000019123
Gadus morhua
ENSGMOG00000019123
I
0.774
gfi1b
Danio rerio
ENSDARG00000079947
I
0.772
ENSLOCG00000005750
Lepisosteus oculatus
ENSLOCG00000005750
I
0.772
gfi1b
Gasterosteus aculeatus
ENSGACG00000018134
I
0.770
gfi1b.L
Xenopus laevis
XB-GENE-944429
I
0.769
gfi1b
Xenopus tropicalis
XB-GENE-944426
I
0.769
ENSAMXG00000004835
Astyanax mexicanus
ENSAMXG00000004835
I
0.767
gfi1ab
Tetraodon nigroviridis
ENSTNIG00000000651
I
0.767
LotgiG83709
Lottia gigantea
LotgiG83709
I
0.766
ENSLOCG00000004711
Lepisosteus oculatus
ENSLOCG00000004711
I
0.766
SPU_012645
Strongylocentrotus purpuratus
SPU_012645
I
0.766
CGI_10017941
Crassostrea gigas
CGI_10017941
I
0.766
Gfo_R010648
Geospiza fortis
Gfo_R010648
I
0.765
ENSGALG00000005940
Gallus gallus
ENSGALG00000005940
I
0.765
gfi1ab
Danio rerio
ENSDARG00000044457
I
0.765
Tal_R006464
Tyto alba
Tal_R006464
I
0.765
ENSAPLG00000015700
Anas platyrhynchos
ENSAPLG00000015700
I
0.765
Sakowv30015313m.g
Saccoglossus kowalevskii
Sakowv30015313m.g
I
0.765
GFI1
Taeniopygia guttata
ENSTGUG00000006060
I
0.765
ENSGMOG00000007737
Gadus morhua
ENSGMOG00000007737
I
0.765
Alligator_sinensis_CCG007476.1
Alligator sinensis
Alligator_sinensis_CCG007476.1
I
0.765
ENSPFOG00000023214
Poecilia formosa
ENSPFOG00000023214
I
0.765
Afo_R006147
Aptenodytes forsteri
Afo_R006147
I
0.765
Aan_R000889
Calypte anna
Aan_R000889
I
0.765
Cmyd_10004881
Chelonia mydas
Cmyd_10004881
I
0.765
ENSPSIG00000008734
Pelodiscus sinensis
ENSPSIG00000008734
I
0.765
GFI1
Meleagris gallopavo
ENSMGAG00000008187
I
0.765
Brh_R002465
Buceros rhinoceros
Brh_R002465
I
0.765
tetur16g01570
Tetranychus urticae
tetur16g01570
I
0.764
gfi1
Xenopus tropicalis
XB-GENE-960553
I
0.764
Ogr09401
Ophisaurus gracilis
Ogr09401
I
0.764
Pvit_00259
Pogona vitticeps
Pvit_00259
I
0.764
GFI1
Otolemur garnettii
ENSOGAG00000027913
I
0.764
GFI1
Homo sapiens
ENSG00000162676
D
0.764
GFI1
Felis catus
ENSFCAG00000005914
I
0.764
GFI1
Erinaceus europaeus
ENSEEUG00000000198
I
0.764
gfi1ab
Gasterosteus aculeatus
ENSGACG00000004257
I
0.764
GFI1
Gorilla gorilla
ENSGGOG00000005320
I
0.764
GFI1
Myotis lucifugus
ENSMLUG00000015191
I
0.764
GFI1
Loxodonta africana
ENSLAFG00000018346
I
0.764
ENSLACG00000013362
Latimeria chalumnae
ENSLACG00000013362
I
0.764
GFI1
Equus caballus
ENSECAG00000006647
I
0.764
GFI1
Dasypus novemcinctus
ENSDNOG00000000782
I
0.764
GFI1
Bos taurus
ENSBTAG00000016723
I
0.764
ENSAMEG00000013858
Ailuropoda melanoleuca
ENSAMEG00000013858
I
0.764
GFI1
Anolis carolinensis
ENSACAG00000004498
I
0.764
GFI1
Canis familiaris
ENSCAFG00000020155
I
0.764
GFI1
Callithrix jacchus
ENSCJAG00000017609
I
0.764
gfi1aa
Danio rerio
ENSDARG00000020746
I
0.764
GFI1
Cavia porcellus
ENSCPOG00000011727
I
0.764
GFI1
Tursiops truncatus
ENSTTRG00000000082
I
0.764
ENSMMUG00000005068
Macaca mulatta
ENSMMUG00000005068
I
0.764
GFI1
Pteropus vampyrus
ENSPVAG00000006928
I
0.764
ENSPANG00000016433
Papio anubis
ENSPANG00000016433
I
0.764
Gfi1
Rattus norvegicus
ENSRNOG00000002042
D
0.764
GFI1
Sus scrofa
ENSSSCG00000006902
I
0.764
gfi1ab
Takifugu rubripes
ENSTRUG00000000415
I
0.764
ENSSTOG00000014583
Ictidomys tridecemlineatus
ENSSTOG00000014583
I
0.764
GFI1
Monodelphis domestica
ENSMODG00000011802
I
0.764
GFI1
Ochotona princeps
ENSOPRG00000001473
I
0.764
Gfi1
Mus musculus
ENSMUSG00000029275
D
0.764
ENSMPUG00000004178
Mustela putorius furo
ENSMPUG00000004178
I
0.764
ENSNLEG00000010470
Nomascus leucogenys
ENSNLEG00000010470
I
0.764
ENSONIG00000019246
Oreochromis niloticus
ENSONIG00000019246
I
0.764
gfi1b
Tetraodon nigroviridis
ENSTNIG00000003834
I
0.762
gfi1b
Takifugu rubripes
ENSTRUG00000004525
I
0.762
CGI_10011355
Crassostrea gigas
CGI_10011355
I
0.762
gfi1b
Oryzias latipes
ENSORLG00000014390
I
0.762
ENSONIG00000013011
Oreochromis niloticus
ENSONIG00000013011
I
0.760
gfi1aa
Gasterosteus aculeatus
ENSGACG00000015674
I
0.756