CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_PATZ1_10027570
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_PATZ1_10027570
T136079_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC
GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.827
1.000
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.827
1.000
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_PATZ1_10027570
C2H2 ZF
255
277
LPCGLCGKVFTDANRLRQHEAQH
Myotis_brandtii_PATZ1_10027570
C2H2 ZF
319
340
ACEICGKIFRDVYHLNRHKLSH
Myotis_brandtii_PATZ1_10027570
C2H2 ZF
346
368
YSCPVCGLRFKRKDRMSYHVRSH
Myotis_brandtii_PATZ1_10027570
C2H2 ZF
376
399
YICQSCGKGFSRPDHLNGHIKQVH
Myotis_brandtii_PATZ1_10027570
C2H2 ZF
405
427
HKCQTCNASFATRDRLRSHLACH
Myotis_brandtii_PATZ1_10027570
C2H2 ZF
459
481
FCSICNRGFSSASYLKVHVKTHH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy