CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Myotis_brandtii_ZFP1_10035453
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_ZFP1_10035453
T136172_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.817
0.973
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.817
0.973
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.817
0.973
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.817
0.973
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.817
0.973
Zfp1
M10357_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.805
0.940
Zfp1
M10358_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.805
0.940
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_ZFP1_10035453
C2H2 ZF
165
187
FLCNYCDKAFSFKSLLISHKRIH
Myotis_brandtii_ZFP1_10035453
C2H2 ZF
193
215
YECNVCKKTFSHKANLIKHQRIH
Myotis_brandtii_ZFP1_10035453
C2H2 ZF
221
243
FECLECGKAFTHQSNLIVHQRAH
Myotis_brandtii_ZFP1_10035453
C2H2 ZF
249
271
YECSECGKTFAQKFELTTHQRIH
Myotis_brandtii_ZFP1_10035453
C2H2 ZF
277
299
YECNECAKTFFKKSNLIIHQKIH
Myotis_brandtii_ZFP1_10035453
C2H2 ZF
305
327
YECSECGKSFIQNSQLIIHMRTH
Myotis_brandtii_ZFP1_10035453
C2H2 ZF
333
355
YECTECGKTFSQRSTLRLHLRIH
Myotis_brandtii_ZFP1_10035453
C2H2 ZF
361
383
YECSQCGKAFSRKSRLSVHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy