Myotis_brandtii_ZFP1_10035453 (Myotis brandtii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Myotis_brandtii_ZFP1_10035453 T136172_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH

DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.817 0.973
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC

GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.817 0.973
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH

DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.817 0.973
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM

KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.817 0.973
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH

DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.817 0.973
Zfp1
M10357_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.805 0.940
Zfp1
M10358_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.805 0.940
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ZFP1_10035453 C2H2 ZF 165 187
Myotis_brandtii_ZFP1_10035453 C2H2 ZF 193 215
Myotis_brandtii_ZFP1_10035453 C2H2 ZF 221 243
Myotis_brandtii_ZFP1_10035453 C2H2 ZF 249 271
Myotis_brandtii_ZFP1_10035453 C2H2 ZF 277 299
Myotis_brandtii_ZFP1_10035453 C2H2 ZF 305 327
Myotis_brandtii_ZFP1_10035453 C2H2 ZF 333 355
Myotis_brandtii_ZFP1_10035453 C2H2 ZF 361 383

Links

Other C2H2 ZF family TFs
Other Myotis brandtii TFs

Invalid Input OrderBy

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action