Myotis_brandtii_ZKSCAN1_10002829 (Myotis brandtii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Myotis_brandtii_ZKSCAN1_10002829 T136206_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN1
M05847_2.00 		Homo sapiens
NNNCCTACTAHGH
DCDTAGTAGGNNN		 SMiLE-seq
Isakova et al.(2017)
ZKSCAN1 		0.827 1.000
ZKSCAN1
M08874_2.00 		Homo sapiens
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_HUMAN.H11MO.0.B 		0.827 1.000
Zkscan1
M00771_2.00 		Mus musculus
NNNHDHDNNN
NNNHDHDNNN		 PBM
Weirauch et al.(2013)
pTH2280 		0.825 0.993
Zkscan1
M08985_2.00 		Mus musculus
DVHDBNCCTACTRTGTGCH
DGCACAYAGTAGGNVHDBH		 Misc
Kulakovskiy et al.(2013)
ZKSC1_MOUSE.H11MO.0.A 		0.825 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ZKSCAN1_10002829 C2H2 ZF 299 321
Myotis_brandtii_ZKSCAN1_10002829 C2H2 ZF 327 349
Myotis_brandtii_ZKSCAN1_10002829 C2H2 ZF 355 377
Myotis_brandtii_ZKSCAN1_10002829 C2H2 ZF 383 405
Myotis_brandtii_ZKSCAN1_10002829 C2H2 ZF 411 433
Myotis_brandtii_ZKSCAN1_10002829 C2H2 ZF 439 461

Links

Other C2H2 ZF family TFs
Other Myotis brandtii TFs

Invalid Input OrderBy

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action