Myotis_brandtii_ZNF238_10003031 (Myotis brandtii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Myotis_brandtii_ZNF238_10003031 T136257_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB18
M02916_2.00
Homo sapiens
VMACATCTGGAWN

NWTCCAGATGTKB
SELEX
Jolma et al.(2013)
ZNF238_1
0.827 1.000
ZBTB18
M02917_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Jolma et al.(2013)
ZNF238_2
0.827 1.000
ZBTB18
M04585_2.00
Homo sapiens
NMACATCTGGMHN

NDKCCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX
0.827 1.000
ZBTB18
M08350_2.00
Homo sapiens
MRCAKCTGG

CCAGMTGYK
ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE
0.827 1.000
ZBTB18
M08257_2.00
Homo sapiens
NMGCAGCTGCKB

VMGCAGCTGCKN
ChIP-seq
Najafabadi et al.(2015b)
ZNF238
0.827 1.000
ZBTB18
M08928_2.00
Homo sapiens
VMRCAKCTGGV

BCCAGMTGYKB
Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C
0.827 1.000
ZBTB18
M10282_2.00
Homo sapiens
NNMACATCTGGM

KCCAGATGTKNN
Transfac
Matys et al.(2006)
V$RP58_01
0.827 1.000
ZBTB18
M10283_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RP58_Q3
0.827 1.000
ZBTB18
M04586_2.00
Homo sapiens
NMACATCTGBHNN

NNDVCAGATGTKN
SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ZNF238_10003031 C2H2 ZF 406 428
Myotis_brandtii_ZNF238_10003031 C2H2 ZF 447 468
Myotis_brandtii_ZNF238_10003031 C2H2 ZF 474 496
Myotis_brandtii_ZNF238_10003031 C2H2 ZF 502 525

Links

Other C2H2 ZF family TFs
Other Myotis brandtii TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
FFUJ_08815 Fusarium fujikuroi FFUJ_08815 N 0.000
FOXG_09207 Fusarium oxysporum FOXG_09207 N 0.000
FPSE_06274 Fusarium pseudograminearum FPSE_06274 N 0.000
fgenesh1_pg.sca_10_chr8_2_0000068 Nectria haematococca fgenesh1_pg.sca_10_chr8_2_0000068 N 0.000