CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_ZNF250_10006488
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_ZNF250_10006488
T136260_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.794
0.920
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.794
0.920
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.794
0.920
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.794
0.920
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.794
0.920
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
171
193
YKCIECGKCFGRSSHLLQHQRTH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
199
221
YVCGVCGKAFSQSSVLSKHRRIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
227
249
YECNECGKAFRVSSDLAQHHKIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
255
277
HECLECRKAFTQLSHLIQHQRIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
283
305
YVCPLCGKAFNHSTVLRSHQRVH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
311
333
HECAECGRAFSVKRTLLQHQRVH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
339
361
YSCSECGRTFSDRSVLIQHHNVH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
367
389
YECGECGKAFSHRSTLMNHERIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
395
417
YGCYACGKAFVQHSHLIQHQRVH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
423
445
YVCSECGHAFSARRSLVQHERIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
451
473
FCCTQCDKAFSLKATLIVHLRTH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
479
501
YECSRCGKAFSQYSVLIQHQRIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
507
529
YECAECGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF250
Erinaceus europaeus
ENSEEUG00000004809
I
0.815
ZNF250
Sorex araneus
ENSSARG00000004999
I
0.814
ZNF250
Felis catus
ENSFCAG00000013730
I
0.813
ENSMPUG00000006008
Mustela putorius furo
ENSMPUG00000006008
I
0.813
ZNF250
Canis familiaris
ENSCAFG00000030799
I
0.812
ENSAMEG00000005352
Ailuropoda melanoleuca
ENSAMEG00000005352
I
0.812
ENSSSCG00000027957
Sus scrofa
ENSSSCG00000027957
I
0.811
ZNF250
Ochotona princeps
ENSOPRG00000014807
I
0.800
ZNF250
Pteropus vampyrus
ENSPVAG00000002855
I
0.799
ZNF250
Otolemur garnettii
ENSOGAG00000028856
I
0.798
Zfp647
Dipodomys ordii
ENSDORG00000003353
I
0.798
ZNF250
Tupaia belangeri
ENSTBEG00000003713
I
0.796
Zfp647
Rattus norvegicus
ENSRNOG00000050661
I
0.796
LOC102555083
Rattus norvegicus
ENSRNOG00000050651
I
0.796
Zfp647
Mus musculus
ENSMUSG00000054967
I
0.796
ZNF250
Loxodonta africana
ENSLAFG00000016670
I
0.796
ENSCPOG00000001490
Cavia porcellus
ENSCPOG00000001490
I
0.795
ZNF250
Procavia capensis
ENSPCAG00000000092
I
0.795
ENSGGOG00000010329
Gorilla gorilla
ENSGGOG00000010329
I
0.795
ENSCSAG00000008192
Chlorocebus sabaeus
ENSCSAG00000008192
I
0.794
ENSMMUP00000031824
Macaca fascicularis
ENSMMUP00000031824
I
0.794
ZNF250
Homo sapiens
ENSG00000196150
D
0.794
ZNF250
Callithrix jacchus
ENSCJAG00000021381
I
0.794
ZNF250
Pan troglodytes
ENSPTRG00000023097
I
0.794
ENSNLEG00000011038
Nomascus leucogenys
ENSNLEG00000011038
I
0.794
ENSPANG00000017990
Papio anubis
ENSPANG00000017990
I
0.794
ENSPPYG00000018996
Pongo abelii
ENSPPYG00000018996
I
0.794
ZNF250
Macaca mulatta
ENSMMUG00000011548
I
0.794
ZNF250
Echinops telfairi
ENSETEG00000012126
I
0.793
ZNF250
Tursiops truncatus
ENSTTRG00000013860
I
0.787
ZNF250
Dasypus novemcinctus
ENSDNOG00000037059
I
0.760