CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_ZNF250_10006488
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_ZNF250_10006488
T136260_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.794
0.920
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.794
0.920
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.794
0.920
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.794
0.920
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.794
0.920
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
171
193
YKCIECGKCFGRSSHLLQHQRTH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
199
221
YVCGVCGKAFSQSSVLSKHRRIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
227
249
YECNECGKAFRVSSDLAQHHKIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
255
277
HECLECRKAFTQLSHLIQHQRIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
283
305
YVCPLCGKAFNHSTVLRSHQRVH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
311
333
HECAECGRAFSVKRTLLQHQRVH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
339
361
YSCSECGRTFSDRSVLIQHHNVH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
367
389
YECGECGKAFSHRSTLMNHERIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
395
417
YGCYACGKAFVQHSHLIQHQRVH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
423
445
YVCSECGHAFSARRSLVQHERIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
451
473
FCCTQCDKAFSLKATLIVHLRTH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
479
501
YECSRCGKAFSQYSVLIQHQRIH
Myotis_brandtii_ZNF250_10006488
C2H2 ZF
507
529
YECAECGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy