CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_ZNF35_10014216
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_ZNF35_10014216
T136298_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF35
M08250_2.00
Homo sapiens
TTVTARRARCTCTTTAYATAT
ATATRTAAAGAGYTYYTABAA
ChIP-seq
Najafabadi et al.(2015b)
ZNF35
0.825
0.992
ZNF35
M08334_2.00
Homo sapiens
BTTNTTKDYYHNHNDNDDCTYTTTDYWTNH
DNAWRHAAARAGHHNHNDNDRRHMAANAAV
ChIP-seq
Schmitges et al.(2016)
P13682_1-10.RCADE
0.825
0.992
ZNF35
M10257_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF35_04
0.825
0.992
Zfp105
M00148_2.00
Mus musculus
TTNTTKDNNN
NNNHMAANAA
PBM
Badis et al.(2009)
Zfp105_2634
0.813
0.960
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
222
244
FTCSVCGKGFSQSANLVVHQRIH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
250
272
FECHECGKAFIQSANLVVHQRIH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
278
300
YVCSKCGKAFTQSSNLTVHQKIH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
306
328
FKCSECEKAFSYSSQLARHQKVH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
334
356
YECNECGKTFTRSSNLIVHQRIH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
362
384
FACNDCGKAFTQSANLIVHQRSH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
390
412
YECKECGKAFSCFSHLIVHQRIH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
418
440
YDCSECGKAFSQLSCLIVHQRIH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
446
468
YVCNECGKAFTCSSYLLIHQRIH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
474
496
YTCSECGKAFRQRSSLTVHQRTH
Myotis_brandtii_ZNF35_10014216
C2H2 ZF
502
524
YECEKCGAAFISNSHLMRHHRTH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy