Myotis_brandtii_ZNF354A_10002378 (Myotis brandtii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Myotis_brandtii_ZNF354A_10002378 T136299_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY

RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.822 0.987
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC

GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.822 0.987
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW

WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.822 0.987
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT

AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.775 0.923
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 204 226
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 232 254
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 260 282
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 288 310
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 344 366
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 372 394
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 400 422
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 428 450
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 456 478
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 484 506
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 512 534
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 540 562
Myotis_brandtii_ZNF354A_10002378 C2H2 ZF 568 590

Links

Other C2H2 ZF family TFs
Other Myotis brandtii TFs

Invalid Input OrderBy

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action