CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_ZNF354A_10002378
(
Myotis brandtii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Myotis_brandtii_ZNF354A_10002378
T136299_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.822
0.987
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.822
0.987
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.822
0.987
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.775
0.923
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
204
226
YKCSICEKTFINTSSLRKHEKNH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
232
254
FKCKECSKAFNQSSALIQHQITH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
260
282
YVCKECGKAFTLSTSLYKHLRTH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
288
310
YRCKECGKSFSRRSGLFIHQKIH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
344
366
YLCNECGNTFKSSSSLRYHQRIH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
372
394
FKCSECGRAFSQSASLIQHERIH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
400
422
YRCNECGKGFTSISRLNRHRIIH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
428
450
YNCSECGKALSSHSTLIIHERIH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
456
478
CKCKVCGKAFRQSSALIQHQRMH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
484
506
YKCNECGKTFRCNSSLSNHQRIH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
512
534
YRCEECGISFGQSSALIQHRRIH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
540
562
FKCNTCGKTFRQSSSRIAHQRIH
Myotis_brandtii_ZNF354A_10002378
C2H2 ZF
568
590
YECNTCGKLFNHRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Myotis brandtii
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy