CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr03307
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr03307
T136553_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb3
M00152_2.00
Mus musculus
MRCTGSHNN
NNDSCAGYK
PBM
Badis et al.(2009)
Zbtb3_1048
0.827
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr03307
C2H2 ZF
394
415
TCKTCGKTFSCSYTLRRHATVH
Ogr03307
C2H2 ZF
421
444
YECRYCMRSYTQSGDLYRHIRKAH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy