Ogr04283 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr04283 T136571_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KLF10
M04489_2.00
Homo sapiens
RMCACRCCCMYVHCACRCCCMC

GKGGGYGTGDBRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_HT-SELEX
0.803 0.870
KLF10
M08246_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF10
0.803 0.870
KLF10
M08317_2.00
Homo sapiens
SMCMCRCCCMYNBSN

NSVNRKGGGYGKGKS
ChIP-seq
Schmitges et al.(2016)
Q13118.MEME
0.803 0.870
KLF10
M10228_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TIEG1_Q6
0.803 0.870
KLF10
M04490_2.00
Homo sapiens
RMCACRCCCMYGMCACRCCCHC

GDGGGYGTGKCRKGGGYGTGKY
SELEX
Yin et al.(2017)
KLF10_eDBD_Methyl-HT-SELEX
0.803 0.870
KLF11
M00242_2.00
Homo sapiens
MCGCCCCC

GGGGGCGK
PBM
Barrera et al.(2016)
KLF11_REF
0.776 0.942
KLF11
M04554_2.00
Homo sapiens
VMCMCRCCCMYNMCACGCCCMC

GKGGGCGTGKNRKGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_HT-SELEX
0.776 0.942
KLF11
M10261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKLF_Q5
0.776 0.942
KLF11
M00241_2.00
Homo sapiens
MCGCCCMC

GKGGGCGK
PBM
Barrera et al.(2016)
KLF11_R402Q
0.776 0.942
KLF11
M04555_2.00
Homo sapiens
VMCMCRCCCHYNHCACGCCCMC

GKGGGCGTGDNRDGGGYGKGKB
SELEX
Yin et al.(2017)
KLF11_eDBD_Methyl-HT-SELEX
0.776 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr04283 C2H2 ZF 416 440
Ogr04283 C2H2 ZF 446 470
Ogr04283 C2H2 ZF 476 498

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
7936_YGL096W Saccharomyces mikatae 7936_YGL096W I 0.000
AMAG_02700 Allomyces macrogynus AMAG_02700 N 0.000
AMAG_06322 Allomyces macrogynus AMAG_06322 N 0.000
BN7_5448 Wickerhamomyces ciferrii BN7_5448 N 0.000
CLEC012261 Cimex lectularius CLEC012261 I 0.000
csin111072 Clonorchis sinensis csin111072 I 0.000
ENSCSAG00000000068 Chlorocebus sabaeus ENSCSAG00000000068 I 0.000
fgeneshNG_pg.scaffold_64000050 Naegleria gruberi fgeneshNG_pg.scaffold_64000050 N 0.000
H311_02800 Anncaliia algerae H311_02800 N 0.000
Kwal_11092 Kluyveromyces waltii Kwal_11092 I 0.000
L798_02881 Zootermopsis nevadensis L798_02881 I 0.000
LDEC008003 Leptinotarsa decemlineata LDEC008003 I 0.000
M896_051500 Ordospora colligata M896_051500 N 0.000
NCER_101892 Nosema ceranae NCER_101892 N 0.000
PHUM569520 Pediculus humanus PHUM569520 I 0.000
RPRC000231 Rhodnius prolixus RPRC000231 I 0.000
SAKL0A05610g Lachancea kluyveri SAKL0A05610g I 0.000
SMAR003960 Strigamia maritima SMAR003960 I 0.000
Smp_154790 Schistosoma mansoni Smp_154790 I 0.000
SMU15028100 Schmidtea mediterranea SMU15028100 I 0.000
TC006040 Tribolium castaneum TC006040 I 0.000
TSTA_022330 Talaromyces stipitatus TSTA_022330 N 0.000
VICG_02118 Vittaforma corneae VICG_02118 I 0.000