CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ogr05927
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr05927
T136596_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb1
M00775_2.00
Mus musculus
NHMMCGCRHN
NDYGCGKKDN
PBM
Weirauch et al.(2013)
pTH2366
0.780
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr05927
C2H2 ZF
529
550
FRCPNCGLRFETENSVVEHMSS
Ogr05927
C2H2 ZF
569
595
HRRKHFCNLCGKGFYQRCHLREHYTVH
Ogr05927
C2H2 ZF
601
623
FVCQTCGKQFLRERQLRLHNDMH
Ogr05927
C2H2 ZF
657
679
TICQVCFQVFPNNEQLEQHMDVH
Ogr05927
C2H2 ZF
681
704
YTCGVCGAKFTLRKDMRSHYNAKH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy