CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ogr06398
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr06398
T136604_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF653
M08248_2.00
Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD
HWTWDNWGTCGGMRGDHRNDAAWN
ChIP-seq
Najafabadi et al.(2015b)
ZNF653
0.823
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr06398
C2H2 ZF
359
384
FHCPYEGCTQVYVALSSFQNHVNLVH
Ogr06398
C2H2 ZF
390
414
KVCPHQGCGKKFYLSNHLRRHMIIH
Ogr06398
C2H2 ZF
420
442
FTCETCGKSFKRKNHLEVHRRTH
Ogr06398
C2H2 ZF
448
470
LQCEICGYQCRQRASLNWHMKKH
Ogr06398
C2H2 ZF
478
501
FTCEHCGKRFEKLDSVKFHKLKSH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy