Ogr09934 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr09934 T136649_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mtf1
M00136_2.00
Mus musculus
CGTGYGCAM

KTGCRCACG
PBM
Badis et al.(2009)
Mtf1_2377
0.821 0.993
MTF1
M02922_2.00
Homo sapiens
GTGCCGTGTGCAAA

TTTGCACACGGCAC
SELEX
Jolma et al.(2013)
MTF1_1
0.821 0.993
MTF1
M04617_2.00
Homo sapiens
NDNDYCGTGTGCAAARN

NYTTTGCACACGRHNHN
SELEX
Yin et al.(2017)
MTF1_eDBD_HT-SELEX
0.821 0.993
MTF1
M08942_2.00
Homo sapiens
MGKVHCGTGYGCADMDB

VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_HUMAN.H11MO.0.C
0.821 0.993
Mtf1
M08981_2.00
Mus musculus
MGKVHCGTGYGCADMDB

VHKHTGCRCACGDBMCK
Misc
Kulakovskiy et al.(2013)
MTF1_MOUSE.H11MO.0.C
0.821 0.993
MTF1
M10308_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_01
0.821 0.993
MTF1
M10309_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_02
0.821 0.993
MTF1
M10310_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q4
0.821 0.993
MTF1
M10311_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MTF1_Q5
0.821 0.993
MTF1
M04618_2.00
Homo sapiens
NRNRCCGTGTGCAAARV

BYTTTGCACACGGYNYN
SELEX
Yin et al.(2017)
MTF1_eDBD_Methyl-HT-SELEX
0.821 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr09934 C2H2 ZF 141 165
Ogr09934 C2H2 ZF 171 195
Ogr09934 C2H2 ZF 201 225
Ogr09934 C2H2 ZF 230 254
Ogr09934 C2H2 ZF 260 284
Ogr09934 C2H2 ZF 290 314

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
e_gw1.7.117.1 Cryphonectria parasitica e_gw1.7.117.1 N 0.000
PV11_09417 Exophiala sideris PV11_09417 N 0.000
NechaG1729 Fusarium solani NechaG1729 N 0.000
gw1.73.1.1 Nectria haematococca gw1.73.1.1 N 0.000
TSTA_023870 Talaromyces stipitatus TSTA_023870 N 0.000