Ogr12162 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr12162 T136670_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB7A
M02914_2.00
Homo sapiens
NRCGACCACCNV

BNGGTGGTCGYN
SELEX
Jolma et al.(2013)
ZBTB7A_1
0.825 0.978
ZBTB7A
M04579_2.00
Homo sapiens
DCGACCMCCVH

DBGGKGGTCGH
SELEX
Yin et al.(2017)
ZBTB7A_eDBD_HT-SELEX
0.825 0.978
ZBTB7A
M08095_2.00
Homo sapiens
NBSRCTTCCGGNN

NNCCGGAAGYSVN
ChIP-seq
Mathelier et al.(2014)
MA0750.2
0.825 0.978
ZBTB7A
M07937_2.00
Homo sapiens
SNVVGMCCCYNNSBS

SVSNNRGGGKCBBNS
ChIP-seq
Gerstein et al.(2012)
K562_ZBTB7A_HudsonAlpha
0.825 0.978
ZBTB7A
M08926_2.00
Homo sapiens
VVGMCCCYB

VRGGGKCBB
Misc
Kulakovskiy et al.(2013)
ZBT7A_HUMAN.H11MO.0.A
0.825 0.978
Zbtb7a
M08991_2.00
Mus musculus
VVGMCCCYB

VRGGGKCBB
Misc
Kulakovskiy et al.(2013)
ZBT7A_MOUSE.H11MO.0.B
0.825 0.978
ZBTB7A
M10273_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q2
0.825 0.978
ZBTB7A
M10274_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q3
0.825 0.978
ZBTB7A
M10275_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LRF_Q6
0.825 0.978
ZBTB7A
M10276_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB7A_02
0.825 0.978
ZBTB7A
M10277_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBTB7A_03
0.825 0.978
ZBTB7A
M04580_2.00
Homo sapiens
DCGACCACCNH

DNGGTGGTCGH
SELEX
Yin et al.(2017)
ZBTB7A_eDBD_Methyl-HT-SELEX
0.825 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr12162 C2H2 ZF 222 244
Ogr12162 C2H2 ZF 250 272
Ogr12162 C2H2 ZF 278 300
Ogr12162 C2H2 ZF 306 327

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.000
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.000
ASU_12247 Ascaris suum ASU_12247 I 0.000
Bm4236 Brugia malayi Bm4236 I 0.000
BXY_1109100 Bursaphelenchus xylophilus BXY_1109100 N 0.000
CBG14093 Caenorhabditis briggsae CBG14093 I 0.000
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.000
CJA18701 Caenorhabditis japonica CJA18701 I 0.000
CRE00458 Caenorhabditis remanei CRE00458 I 0.000
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.000
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.000
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.000
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.000
LOAG_03108 Loa loa LOAG_03108 I 0.000
MhA1_Contig334.frz3.gene6 Meloidogyne hapla MhA1_Contig334.frz3.gene6 I 0.000
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.000
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.000
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.000
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.000
nRc.2.0.1.g33153 Romanomermis culicivorax nRc.2.0.1.g33153 N 0.000
SBAD_0000636401 Soboliphyme baturini SBAD_0000636401 N 0.000
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.000
L889_g19596 Steinernema feltiae L889_g19596 I 0.000
L893_g11388 Steinernema glaseri L893_g11388 I 0.000
L898_g24033 Steinernema monticolum L898_g24033 I 0.000
L898_g9710 Steinernema monticolum L898_g9710 I 0.000
L898_g10136 Steinernema monticolum L898_g10136 I 0.000
L892_g2739 Steinernema scapterisci L892_g2739 I 0.000
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.000
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.000
D917_09259 Trichinella nativa D917_09259 N 0.000
EFV59471 Trichinella spiralis EFV59471 N 0.000
TMUE_s0035003400 Trichuris muris TMUE_s0035003400 N 0.000
D918_06537 Trichuris suis D918_06537 N 0.000
TTRE_0000415001 Trichuris trichiura TTRE_0000415001 N 0.000