Ogr13905 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr13905 T136690_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZBTB26
M04547_2.00
Homo sapiens
NYDTTCTRGADH

DHTCYAGAAHRN
SELEX
Yin et al.(2017)
ZBTB26_FL_HT-SELEX
0.827 1.000
ZBTB26
M08340_2.00
Homo sapiens
CRCGCRCRCDCRCRMRCRCRC

GYGYGYKYGYGHGYGYGCGYG
ChIP-seq
Schmitges et al.(2016)
Q9HCK0.MEME
0.827 1.000
ZBTB26
M04548_2.00
Homo sapiens
NBDTTCTRGADN

NHTCYAGAAHVN
SELEX
Yin et al.(2017)
ZBTB26_FL_Methyl-HT-SELEX
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr13905 C2H2 ZF 206 228
Ogr13905 C2H2 ZF 231 253
Ogr13905 C2H2 ZF 259 281
Ogr13905 C2H2 ZF 287 310

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ADIR005096 Anopheles dirus ADIR005096 I 0.000
AEPI009051 Anopheles epiroticus AEPI009051 I 0.000
AFUN000829 Anopheles funestus AFUN000829 I 0.000
AGAP009749 Anopheles gambiae AGAP009749 I 0.000
AMEC017008 Anopheles melas AMEC017008 I 0.000
AQUA011339 Anopheles quadriannulatus AQUA011339 I 0.000
GB44259 Apis mellifera GB44259 N 0.000
ACEP18972 Atta cephalotes ACEP18972 I 0.000
Cflo_03170--XP_394708.3_APIME Camponotus floridanus Cflo_03170--XP_394708.3_APIME I 0.000
CapteG180266 Capitella teleta CapteG180266 N 0.000
CpipJ_CPIJ014773 Culex pipiens CpipJ_CPIJ014773 I 0.000
CPIJ014773 Culex quinquefasciatus CPIJ014773 I 0.000
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I 0.000
YQE_09240 Dendroctonus ponderosae YQE_09240 I 0.000
EmuJ_000805200 Echinococcus multilocularis EmuJ_000805200 N 0.000
Hsal_13684--XP_394708.3_APIME Harpegnathos saltator Hsal_13684--XP_394708.3_APIME I 0.000
HelroG110615 Helobdella robusta HelroG110615 N 0.000
LotgiG179263 Lottia gigantea LotgiG179263 N 0.000
PHUM505970 Pediculus humanus PHUM505970 I 0.000
SMAR013730 Strigamia maritima SMAR013730 N 0.000
TC004710 Tribolium castaneum TC004710 I 0.000
L798_12084 Zootermopsis nevadensis L798_12084 I 0.000