Ogr13906 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr13906 T136691_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB6
M08364_2.00 		Homo sapiens
SBNGCTCCAKVDYCN
NGRHBMTGGAGCNVS		 ChIP-seq
Schmitges et al.(2016)
Q15916.MEME 		0.807 0.967
ZBTB6
M08940_2.00 		Homo sapiens
NRGCTCCAKCDYC
GRHGMTGGAGCYN		 Misc
Kulakovskiy et al.(2013)
ZBTB6_HUMAN.H11MO.0.C 		0.807 0.967
ZBTB6
M10307_2.00 		Homo sapiens
BGGCTCYAKSRYC
GRYSMTRGAGCCV		 Transfac
Matys et al.(2006)
V$ZID_01 		0.807 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr13906 C2H2 ZF 169 191
Ogr13906 C2H2 ZF 194 216
Ogr13906 C2H2 ZF 222 244
Ogr13906 C2H2 ZF 250 273

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

Invalid Input OrderBy

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action