Ogr16798 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr16798 T136745_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF276
M04495_2.00 		Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN		 SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX 		0.816 0.974
ZNF276
M04496_2.00 		Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS		 SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX 		0.816 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr16798 C2H2 ZF 398 423
Ogr16798 C2H2 ZF 430 454
Ogr16798 C2H2 ZF 460 482
Ogr16798 C2H2 ZF 488 510
Ogr16798 C2H2 ZF 518 541

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

Invalid Input OrderBy

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action