CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr16901
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr16901
T136748_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLF13
M02903_2.00
Homo sapiens
DDRMCACGCCCCYTTNDK
MHNAARGGGGCGTGKYHH
SELEX
Jolma et al.(2013)
KLF13_1
0.784
0.913
KLF13
M04537_2.00
Homo sapiens
NRCCACRCCCMCN
NGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_eDBD_HT-SELEX
0.784
0.913
KLF13
M04539_2.00
Homo sapiens
NRCCACRCCCMYN
NRKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_FL_HT-SELEX
0.784
0.913
KLF13
M04538_2.00
Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_eDBD_Methyl-HT-SELEX
0.784
0.913
KLF13
M04540_2.00
Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_FL_Methyl-HT-SELEX
0.784
0.913
Klf9
M00777_2.00
Mus musculus
NCCGTTAN
NTAACGGN
PBM
Weirauch et al.(2013)
pTH2353
0.765
0.826
KLF9
M08088_2.00
Homo sapiens
NVMCACACCCMBN
NVKGGGTGTGKBN
ChIP-seq
Mathelier et al.(2014)
MA1107.1
0.765
0.826
KLF9
M08880_2.00
Homo sapiens
NGCCMCGCCCMCBBS
SVVGKGGGCGKGGCN
Misc
Kulakovskiy et al.(2013)
KLF9_HUMAN.H11MO.0.C
0.765
0.826
Klf9
M10345_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB1_01
0.765
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr16901
C2H2 ZF
156
180
HKCHYVGCEKVYGKSSHLKAHLRTH
Ogr16901
C2H2 ZF
186
210
FECRWEECNKKFARSDELARHFRTH
Ogr16901
C2H2 ZF
216
238
FGCPLCEKRFMRSDHLTKHARRH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy