Ogr17806 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr17806 T136762_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM

KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.818 0.956
GLIS3
M10169_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.818 0.956
GLIS3
M10170_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.818 0.956
GLIS3
M10171_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.818 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr17806 C2H2 ZF 344 369
Ogr17806 C2H2 ZF 378 405
Ogr17806 C2H2 ZF 412 435
Ogr17806 C2H2 ZF 441 465
Ogr17806 C2H2 ZF 471 495

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

Invalid Input OrderBy

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action