CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr17806
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr17806
T136762_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.818
0.956
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.818
0.956
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.818
0.956
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.818
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr17806
C2H2 ZF
344
369
HSCRWIDCRAIYDQQEELVRHIEKMH
Ogr17806
C2H2 ZF
378
405
FTCFWAGCPRRYKPFNARYKLLIHMRVH
Ogr17806
C2H2 ZF
412
435
KCTFEGCQKAFSRLENLKIHLRSH
Ogr17806
C2H2 ZF
441
465
YLCQHPGCQKAFSNSSDRAKHQRTH
Ogr17806
C2H2 ZF
471
495
YACQIPGCSKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy