Ogr18022 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr18022 T136766_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFX
M08850_2.00
Homo sapiens
YBVGGCCTVS

SBAGGCCBVR
Misc
Kulakovskiy et al.(2013)
ZFX_HUMAN.H11MO.0.A
0.785 0.946
ZFX
M10098_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFX_01
0.785 0.946
Zfx
M08100_2.00
Mus musculus
BBVRSCBVGGCCTV

BAGGCCBVGSYBVV
ChIP-seq
Mathelier et al.(2014)
MA0146.2
0.781 0.943
Zfx
M09017_2.00
Mus musculus
VVSVSBNBBAGGCCBVGSH

DSCBVGGCCTVVNVSBSBB
Misc
Kulakovskiy et al.(2013)
ZFX_MOUSE.H11MO.0.B
0.781 0.943
Zfx
M09517_2.00
Mus musculus
BNAGGCCT

AGGCCTNV
Misc
Heinz et al.(2010)
mES-Zfx_GSE11431
0.781 0.943
Zfx
M00788_2.00
Mus musculus
NRGGCCNNN

NNNGGCCYN
PBM
Weirauch et al.(2013)
pTH2933
0.781 0.940
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr18022 C2H2 ZF 412 434
Ogr18022 C2H2 ZF 444 466
Ogr18022 C2H2 ZF 476 498
Ogr18022 C2H2 ZF 507 530
Ogr18022 C2H2 ZF 536 558
Ogr18022 C2H2 ZF 564 587
Ogr18022 C2H2 ZF 593 615
Ogr18022 C2H2 ZF 621 644
Ogr18022 C2H2 ZF 650 672
Ogr18022 C2H2 ZF 678 701
Ogr18022 C2H2 ZF 707 729
Ogr18022 C2H2 ZF 735 758
Ogr18022 C2H2 ZF 764 787

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

Invalid Input OrderBy

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action