CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr18022
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr18022
T136766_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFX
M08850_2.00
Homo sapiens
YBVGGCCTVS
SBAGGCCBVR
Misc
Kulakovskiy et al.(2013)
ZFX_HUMAN.H11MO.0.A
0.785
0.946
ZFX
M10098_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFX_01
0.785
0.946
Zfx
M08100_2.00
Mus musculus
BBVRSCBVGGCCTV
BAGGCCBVGSYBVV
ChIP-seq
Mathelier et al.(2014)
MA0146.2
0.781
0.943
Zfx
M09017_2.00
Mus musculus
VVSVSBNBBAGGCCBVGSH
DSCBVGGCCTVVNVSBSBB
Misc
Kulakovskiy et al.(2013)
ZFX_MOUSE.H11MO.0.B
0.781
0.943
Zfx
M09517_2.00
Mus musculus
BNAGGCCT
AGGCCTNV
Misc
Heinz et al.(2010)
mES-Zfx_GSE11431
0.781
0.943
Zfx
M00788_2.00
Mus musculus
NRGGCCNNN
NNNGGCCYN
PBM
Weirauch et al.(2013)
pTH2933
0.781
0.940
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr18022
C2H2 ZF
412
434
YPCMICGKKFKSRGFLKRHMKNH
Ogr18022
C2H2 ZF
444
466
YRCTDCDYTTNKKLSLHNHLESH
Ogr18022
C2H2 ZF
476
498
IECDECGKSFSHAGALFTHKMVH
Ogr18022
C2H2 ZF
507
530
HKCKFCEYETAEQGLLNRHLLAVH
Ogr18022
C2H2 ZF
536
558
HICVECGKGFRHPSELKKHMRIH
Ogr18022
C2H2 ZF
564
587
YQCQYCEYRSADSSNLKTHVKTRH
Ogr18022
C2H2 ZF
593
615
FKCDICFQIFSDTKELQQHILMH
Ogr18022
C2H2 ZF
621
644
HQCLHCDHKSSNSSDLKRHIISVH
Ogr18022
C2H2 ZF
650
672
HKCDMCDKGFHRPSELKKHVAVH
Ogr18022
C2H2 ZF
678
701
HQCRHCDFKIADPFVLSRHILSVH
Ogr18022
C2H2 ZF
707
729
FRCKRCKKGFKLQMELKKHMKTH
Ogr18022
C2H2 ZF
735
758
YQCEYCEYSTTDASGFKRHVISIH
Ogr18022
C2H2 ZF
764
787
HRCDFCKKGFRRPSEKNQHILRHH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy