CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr18895
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr18895
T136774_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG
CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.821
0.975
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG
CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.821
0.975
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.821
0.975
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH
DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.821
0.975
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH
DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.821
0.975
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB
VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.821
0.975
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV
BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.821
0.975
ZNF143
M10249_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.821
0.975
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN
NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.763
0.839
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT
ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.763
0.839
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY
RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.763
0.839
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN
NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.763
0.839
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr18895
C2H2 ZF
236
260
FRCDYDGCGKLYTTAHHLKVHERSH
Ogr18895
C2H2 ZF
266
290
YQCDHPGCGKAFATGYGLKSHVRTH
Ogr18895
C2H2 ZF
296
320
YRCSEENCTKSFKTSGDLQKHIRTH
Ogr18895
C2H2 ZF
326
350
FKCPFEGCGRSFTTSNIRKVHIRTH
Ogr18895
C2H2 ZF
356
380
YYCTEPGCGRAFASATNYKNHVRIH
Ogr18895
C2H2 ZF
386
410
YVCTVPGCDKRFTEYSSLYKHHVVH
Ogr18895
C2H2 ZF
416
439
YNCNHCGKTYKQISTLAMHKKTAH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF143
Ornithorhynchus anatinus
ENSOANG00000005853
I
0.826
ZNF143
Anolis carolinensis
ENSACAG00000009338
I
0.823
AAH73068
Xenopus laevis
AAH73068
I
0.823
znf143
Xenopus tropicalis
XB-GENE-1012504
I
0.823
Zfp143
Mus musculus
ENSMUSG00000061079
D
0.821
ZNF143
Ochotona princeps
ENSOPRG00000005466
I
0.821
ZNF143
Oryctolagus cuniculus
ENSOCUG00000005226
I
0.821
ENSMPUG00000012796
Mustela putorius furo
ENSMPUG00000012796
I
0.821
ZNF143
Macaca mulatta
ENSMMUG00000008758
I
0.821
ENSMEUG00000003014
Macropus eugenii
ENSMEUG00000003014
I
0.821
ENSLOCG00000003619
Lepisosteus oculatus
ENSLOCG00000003619
I
0.821
ZNF143
Meleagris gallopavo
ENSMGAG00000006206
I
0.821
ZNF143
Microcebus murinus
ENSMICG00000004353
I
0.821
ENSPANG00000002501
Papio anubis
ENSPANG00000002501
I
0.821
ZNF143
Monodelphis domestica
ENSMODG00000007909
I
0.821
ZNF143
Pan troglodytes
ENSPTRG00000003349
I
0.821
ENSP00000379847
Macaca fascicularis
ENSP00000379847
I
0.821
Brh_R005520
Buceros rhinoceros
Brh_R005520
I
0.821
Gfo_R011843
Geospiza fortis
Gfo_R011843
I
0.821
Tal_R001092
Tyto alba
Tal_R001092
I
0.821
znf143.S
Xenopus laevis
XB-GENE-1012509
I
0.821
Afo_R014591
Aptenodytes forsteri
Afo_R014591
I
0.821
Aan_R006576
Calypte anna
Aan_R006576
I
0.821
Zfp143
Rattus norvegicus
ENSRNOG00000010087
I
0.821
ZNF143
Loxodonta africana
ENSLAFG00000004487
I
0.821
ZNF143
Sorex araneus
ENSSARG00000007780
I
0.821
ENSTGUG00000008153
Taeniopygia guttata
ENSTGUG00000008153
I
0.821
ENSTSYG00000004324
Tarsius syrichta
ENSTSYG00000004324
I
0.821
ENSPPYG00000003495
Pongo abelii
ENSPPYG00000003495
I
0.821
ZNF143
Otolemur garnettii
ENSOGAG00000011518
I
0.821
ENSAMEG00000003872
Ailuropoda melanoleuca
ENSAMEG00000003872
I
0.821
ZNF143
Canis familiaris
ENSCAFG00000007373
I
0.821
ENSFALG00000000985
Ficedula albicollis
ENSFALG00000000985
I
0.821
ZNF143
Felis catus
ENSFCAG00000002342
I
0.821
ZNF143
Cavia porcellus
ENSCPOG00000003109
I
0.821
ZNF143
Homo sapiens
ENSG00000166478
D
0.821
ENSAPLG00000002385
Anas platyrhynchos
ENSAPLG00000002385
I
0.821
ZNF143
Callithrix jacchus
ENSCJAG00000011327
I
0.821
ZNF143
Equus caballus
ENSECAG00000018889
I
0.821
ZNF143
Gallus gallus
ENSGALG00000005787
I
0.821
ZNF143
Erinaceus europaeus
ENSEEUG00000000955
I
0.821
ENSOARG00000012477
Ovis aries
ENSOARG00000012477
I
0.820
ENSP00000379847-D1
Bos grunniens
ENSP00000379847-D1
I
0.820
ENSPSIG00000009683
Pelodiscus sinensis
ENSPSIG00000009683
I
0.820
ZNF143
Myotis lucifugus
ENSMLUG00000000213
I
0.820
ZNF143
Tursiops truncatus
ENSTTRG00000015353
I
0.820
Alligator_sinensis_CCG018668.1
Alligator sinensis
Alligator_sinensis_CCG018668.1
I
0.820
ENSCSAG00000004520
Chlorocebus sabaeus
ENSCSAG00000004520
I
0.819
Pvit_03784
Pogona vitticeps
Pvit_03784
I
0.816
ENSSTOG00000009647
Ictidomys tridecemlineatus
ENSSTOG00000009647
I
0.815
znf143b
Tetraodon nigroviridis
ENSTNIG00000013739
I
0.811
znf143
Takifugu rubripes
ENSTRUG00000009324
I
0.811
znf143b
Danio rerio
ENSDARG00000041581
I
0.811
ENSGMOG00000001888
Gadus morhua
ENSGMOG00000001888
I
0.810
ENSAMXG00000003833
Astyanax mexicanus
ENSAMXG00000003833
I
0.810
ENSLACG00000017669
Latimeria chalumnae
ENSLACG00000017669
I
0.810
znf143b
Gasterosteus aculeatus
ENSGACG00000009776
I
0.810
ENSXMAG00000005152
Xiphophorus maculatus
ENSXMAG00000005152
I
0.810
ENSPFOG00000008911
Poecilia formosa
ENSPFOG00000008911
I
0.810
ENSONIG00000015524
Oreochromis niloticus
ENSONIG00000015524
I
0.810
Myotis_brandtii_ZNF143_10021171
Myotis brandtii
Myotis_brandtii_ZNF143_10021171
I
0.810
znf143b
Oryzias latipes
ENSORLG00000001130
I
0.806
ENSLOCG00000011655
Lepisosteus oculatus
ENSLOCG00000011655
I
0.779
Sakowv30036637m.g
Saccoglossus kowalevskii
Sakowv30036637m.g
I
0.775
Sakowv30044960m.g
Saccoglossus kowalevskii
Sakowv30044960m.g
I
0.775
BGLB001048
Biomphalaria glabrata
BGLB001048
I
0.771
ZNF76
Cavia porcellus
ENSCPOG00000007381
I
0.770
znf76
Danio rerio
ENSDARG00000013279
I
0.769
Ocbimv22038914m.g
Octopus bimaculoides
Ocbimv22038914m.g
I
0.769
SMAR015659
Strigamia maritima
SMAR015659
I
0.767
LotgiG222832
Lottia gigantea
LotgiG222832
I
0.767
ZNF76
Taeniopygia guttata
ENSTGUG00000001745
I
0.765
Afo_R002092
Aptenodytes forsteri
Afo_R002092
I
0.765
Cmyd_10011173
Chelonia mydas
Cmyd_10011173
I
0.765
ENSPSIG00000005652
Pelodiscus sinensis
ENSPSIG00000005652
I
0.765
Gfo_R002960
Geospiza fortis
Gfo_R002960
I
0.765
Alligator_sinensis_CCG020455.1
Alligator sinensis
Alligator_sinensis_CCG020455.1
I
0.765
ENSFALG00000003698
Ficedula albicollis
ENSFALG00000003698
I
0.765
ZNF76
Bos taurus
ENSBTAG00000006170
I
0.763
ENSAMEG00000000752
Ailuropoda melanoleuca
ENSAMEG00000000752
I
0.763
Tal_R002540
Tyto alba
Tal_R002540
I
0.763
ZNF76
Choloepus hoffmanni
ENSCHOG00000003197
I
0.763
ENSP00000363064
Macaca fascicularis
ENSP00000363064
I
0.763
Myotis_brandtii_ZNF76_10017771
Myotis brandtii
Myotis_brandtii_ZNF76_10017771
I
0.763
ZNF76
Canis familiaris
ENSCAFG00000001304
I
0.763
ENSBTAP00000008112-D1
Bos grunniens
ENSBTAP00000008112-D1
I
0.763
Zfp523
Rattus norvegicus
ENSRNOG00000000501
I
0.763
Zfp523
Mus musculus
ENSMUSG00000024220
I
0.763
ENSMPUG00000003522
Mustela putorius furo
ENSMPUG00000003522
I
0.763
ZNF76
Equus caballus
ENSECAG00000014843
I
0.763
ZNF76
Oryctolagus cuniculus
ENSOCUG00000015630
I
0.763
ZNF76
Otolemur garnettii
ENSOGAG00000002935
I
0.763
ZNF76
Monodelphis domestica
ENSMODG00000013806
I
0.763
ZNF76
Macaca mulatta
ENSMMUG00000023559
I
0.763
ZNF76
Loxodonta africana
ENSLAFG00000026071
I
0.763
ZNF76
Homo sapiens
ENSG00000065029
D
0.763
ZNF76
Felis catus
ENSFCAG00000005893
I
0.763
ZNF76
Myotis lucifugus
ENSMLUG00000008610
I
0.763
ZNF76
Tursiops truncatus
ENSTTRG00000009380
I
0.763
ZNF76
Dasypus novemcinctus
ENSDNOG00000015856
I
0.763
ENSSHAG00000009934
Sarcophilus harrisii
ENSSHAG00000009934
I
0.763
ZNF76
Gorilla gorilla
ENSGGOG00000014188
I
0.763
ZNF76
Sus scrofa
ENSSSCG00000001537
I
0.763
ENSSTOG00000000256
Ictidomys tridecemlineatus
ENSSTOG00000000256
I
0.763
ZNF76
Callithrix jacchus
ENSCJAG00000015519
I
0.763
ZNF76
Pteropus vampyrus
ENSPVAG00000008041
I
0.763
ZNF76
Pan troglodytes
ENSPTRG00000018080
I
0.763
ENSCSAG00000009955
Chlorocebus sabaeus
ENSCSAG00000009955
I
0.763
ENSOPRG00000009136
Ochotona princeps
ENSOPRG00000009136
I
0.763
ENSPPYG00000016525
Pongo abelii
ENSPPYG00000016525
I
0.763
ENSPANG00000021154
Papio anubis
ENSPANG00000021154
I
0.763
ENSAMXG00000008869
Astyanax mexicanus
ENSAMXG00000008869
I
0.762