Ogr18895 (Ophisaurus gracilis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ogr18895 T136774_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG

CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.821 0.975
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG

CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.821 0.975
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.821 0.975
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.821 0.975
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH

DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.821 0.975
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB

VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.821 0.975
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV

BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.821 0.975
ZNF143
M10249_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.821 0.975
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN

NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.763 0.839
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT

ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.763 0.839
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY

RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.763 0.839
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN

NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.763 0.839
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr18895 C2H2 ZF 236 260
Ogr18895 C2H2 ZF 266 290
Ogr18895 C2H2 ZF 296 320
Ogr18895 C2H2 ZF 326 350
Ogr18895 C2H2 ZF 356 380
Ogr18895 C2H2 ZF 386 410
Ogr18895 C2H2 ZF 416 439

Links

Other C2H2 ZF family TFs
Other Ophisaurus gracilis TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL008774 Aedes aegypti AAEL008774 N 0.000
AALB005025 Anopheles albimanus AALB005025 N 0.000
Aan_R000240 Calypte anna Aan_R000240 N 0.000
AARA009353 Anopheles arabiensis AARA009353 N 0.000
AATE007240 Anopheles atroparvus AATE007240 N 0.000
AATE012616 Anopheles atroparvus AATE012616 N 0.000
ACEP15814 Atta cephalotes ACEP15814 N 0.000
ACEP25043 Atta cephalotes ACEP25043 N 0.000
ACHR000819 Anopheles christyi ACHR000819 N 0.000
ACOM031365 Anopheles coluzzii ACOM031365 N 0.000
ACUA013442 Anopheles culicifacies ACUA013442 N 0.000
ACUA027613 Anopheles culicifacies ACUA027613 N 0.000
ADAC008662 Anopheles darlingi ADAC008662 N 0.000
ADIR001615 Anopheles dirus ADIR001615 N 0.000
ADIR007854 Anopheles dirus ADIR007854 N 0.000
AEPI009272 Anopheles epiroticus AEPI009272 N 0.000
AFAF002400 Anopheles farauti AFAF002400 N 0.000
AFAF005225 Anopheles farauti AFAF005225 N 0.000
Afo_R000937 Aptenodytes forsteri Afo_R000937 N 0.000
AFUN003918 Anopheles funestus AFUN003918 N 0.000
AFUN004672 Anopheles funestus AFUN004672 N 0.000
AGAP004994 Anopheles gambiae AGAP004994 N 0.000
Alligator_sinensis_CCG008729.1 Alligator sinensis Alligator_sinensis_CCG008729.1 N 0.000
Alligator_sinensis_CCG008730.1 Alligator sinensis Alligator_sinensis_CCG008730.1 N 0.000
Alligator_sinensis_CCG019089.1 Alligator sinensis Alligator_sinensis_CCG019089.1 N 0.000
AMAM022739 Anopheles maculatus AMAM022739 N 0.000
AMAM022787 Anopheles maculatus AMAM022787 N 0.000
AMEC011358 Anopheles melas AMEC011358 N 0.000
AMEC020736 Anopheles melas AMEC020736 N 0.000
AMEM004507 Anopheles merus AMEM004507 N 0.000
AMEM016792 Anopheles merus AMEM016792 N 0.000
AMIN011106 Anopheles minimus AMIN011106 N 0.000
AMIN011476 Anopheles minimus AMIN011476 N 0.000
AQUA001970 Anopheles quadriannulatus AQUA001970 N 0.000
ASIS018279 Anopheles sinensis ASIS018279 N 0.000
ASTEI02568 Anopheles stephensi ASTEI02568 N 0.000
ASTEI10792 Anopheles stephensi ASTEI10792 N 0.000
Brh_R006141 Buceros rhinoceros Brh_R006141 N 0.000
Brh_R008651 Buceros rhinoceros Brh_R008651 N 0.000
Brh_R010138 Buceros rhinoceros Brh_R010138 N 0.000
Cflo_00612--XP_001121679.1_APIME Camponotus floridanus Cflo_00612--XP_001121679.1_APIME N 0.000
Cflo_01441--XP_624772.1_APIME Camponotus floridanus Cflo_01441--XP_624772.1_APIME N 0.000
Cflo_05095--XP_001121583.1_APIME Camponotus floridanus Cflo_05095--XP_001121583.1_APIME N 0.000
CLEC005259 Cimex lectularius CLEC005259 N 0.000
Cmyd_10014845 Chelonia mydas Cmyd_10014845 N 0.000
CPIJ003991 Culex quinquefasciatus CPIJ003991 N 0.000
CPIJ012897 Culex quinquefasciatus CPIJ012897 N 0.000
CpipJ_CPIJ003991 Culex pipiens CpipJ_CPIJ003991 N 0.000
CpipJ_CPIJ012897 Culex pipiens CpipJ_CPIJ012897 N 0.000
DAPPUDRAFT_55379 Daphnia pulex DAPPUDRAFT_55379 N 0.000
ENSAPLG00000001763 Anas platyrhynchos ENSAPLG00000001763 N 0.000
KLF4 Canis familiaris ENSCAFG00000002797 N 0.000
KLF4 Choloepus hoffmanni ENSCHOG00000000846 N 0.000
KLF8 Choloepus hoffmanni ENSCHOG00000001301 N 0.000
KLF1 Erinaceus europaeus ENSEEUG00000008498 N 0.000
KLF8 Erinaceus europaeus ENSEEUG00000014292 N 0.000
ENSFALG00000011272 Ficedula albicollis ENSFALG00000011272 N 0.000
KLF7 Homo sapiens ENSG00000118263 D 0.000
ENSMEUG00000004560 Macropus eugenii ENSMEUG00000004560 N 0.000
ENSMEUG00000010788 Macropus eugenii ENSMEUG00000010788 N 0.000
ENSMEUG00000011825 Macropus eugenii ENSMEUG00000011825 N 0.000
KLF8 Microcebus murinus ENSMICG00000001146 N 0.000
KLF4 Microcebus murinus ENSMICG00000004603 N 0.000
ENSTSYG00000005368 Tarsius syrichta ENSTSYG00000005368 N 0.000
GB45842 Apis mellifera GB45842 N 0.000
ISCW018441 Ixodes scapularis ISCW018441 N 0.000
LLOJ002499 Lutzomyia longipalpis LLOJ002499 N 0.000
LLOJ003369 Lutzomyia longipalpis LLOJ003369 N 0.000
Myotis_brandtii_Klf2_10008330 Myotis brandtii Myotis_brandtii_Klf2_10008330 N 0.000
Myotis_brandtii_Klf3_10026481 Myotis brandtii Myotis_brandtii_Klf3_10026481 N 0.000
nRc.2.0.1.g39355 Romanomermis culicivorax nRc.2.0.1.g39355 N 0.000
Ocbimv22007604m.g Octopus bimaculoides Ocbimv22007604m.g N 0.000
Ogr15320 Ophisaurus gracilis Ogr15320 N 0.000
Ogr15793 Ophisaurus gracilis Ogr15793 N 0.000
PHUM483510 Pediculus humanus PHUM483510 N 0.000
PHUM484450 Pediculus humanus PHUM484450 N 0.000
PPAI000636 Phlebotomus papatasi PPAI000636 N 0.000
RPRC002307 Rhodnius prolixus RPRC002307 N 0.000
scaffold1198-EXSNAP2012.7 Pristionchus exspectatus scaffold1198-EXSNAP2012.7 N 0.000
SINV10616 Solenopsis invicta SINV10616 N 0.000
SINV21799 Solenopsis invicta SINV21799 N 0.000
SINV23346 Solenopsis invicta SINV23346 N 0.000
Tal_R009016 Tyto alba Tal_R009016 N 0.000
Tal_R010271 Tyto alba Tal_R010271 N 0.000
TC003612 Tribolium castaneum TC003612 N 0.000
YQE_09845 Dendroctonus ponderosae YQE_09845 N 0.000
YQE_12304 Dendroctonus ponderosae YQE_12304 N 0.000