Pm003925 (Prunus mume)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pm003925 T136793_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm003925 C2H2 ZF 77 101
Pm003925 C2H2 ZF 106 130
Pm003925 C2H2 ZF 136 160
Pm003925 C2H2 ZF 166 191
Pm003925 C2H2 ZF 230 255

Links

Other C2H2 ZF family TFs
Other Prunus mume TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa007287mg Prunus persica PRUPE_ppa007287mg N 0.825
Gorai.002G214700 Gossypium raimondii Gorai.002G214700 N 0.812
Eucgr.G00356 Eucalyptus grandis Eucgr.G00356 N 0.809
Ca_00041 Cicer arietinum Ca_00041 N 0.808
evm.TU.supercontig_161.1 Carica papaya evm.TU.supercontig_161.1 N 0.808
Cucsa.076000 Cucumis sativus Cucsa.076000 N 0.806
PK13777.1 Cannabis sativa PK13777.1 N 0.805
30093.m000368 Ricinus communis 30093.m000368 N 0.805
VIT_12s0035g00660 Vitis vinifera VIT_12s0035g00660 N 0.802
TCM_006252 Theobroma cacao TCM_006252 N 0.802
SapurV1A.0136s0510 Salix purpurea SapurV1A.0136s0510 N 0.800
SapurV1A.0618s0010 Salix purpurea SapurV1A.0618s0010 N 0.800
SapurV1A.0470s0060 Salix purpurea SapurV1A.0470s0060 N 0.800
GLYMA08G13310 Glycine max GLYMA08G13310 N 0.800
POPTR_0022s00900 Populus trichocarpa POPTR_0022s00900 N 0.800
POPTR_0004s23050 Populus trichocarpa POPTR_0004s23050 N 0.800
GLYMA05G30150 Glycine max GLYMA05G30150 N 0.800
LjT40J14.40.nc Lotus japonicus LjT40J14.40.nc N 0.798
cassava13878.valid.m1 Manihot esculenta cassava13878.valid.m1 N 0.790
mgf016294m Mimulus guttatus mgf016294m N 0.774