Pvit_03345 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_03345 T136960_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_03345 C2H2 ZF 334 356
Pvit_03345 C2H2 ZF 362 384
Pvit_03345 C2H2 ZF 560 582
Pvit_03345 C2H2 ZF 592 614
Pvit_03345 C2H2 ZF 975 997
Pvit_03345 C2H2 ZF 1003 1025

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG001716.1 Alligator sinensis Alligator_sinensis_CCG001716.1 N 0.817
ENSAPLG00000006498 Anas platyrhynchos ENSAPLG00000006498 N 0.817
SALL4 Anolis carolinensis ENSACAG00000012748 N 0.806
ENSAMXG00000011111 Astyanax mexicanus ENSAMXG00000011111 N 0.811
ENSAMXG00000001254 Astyanax mexicanus ENSAMXG00000001254 N 0.799
Cmyd_10017461 Chelonia mydas Cmyd_10017461 N 0.817
ENSFALG00000013149 Ficedula albicollis ENSFALG00000013149 N 0.817
ENSGMOG00000013383 Gadus morhua ENSGMOG00000013383 N 0.779
ENSGALG00000007834 Gallus gallus ENSGALG00000007834 N 0.817
sall3b Gasterosteus aculeatus ENSGACG00000002533 N 0.800
Gfo_R009587 Geospiza fortis Gfo_R009587 N 0.817
ENSMEUG00000005793 Macropus eugenii ENSMEUG00000005793 N 0.788
SALL4 Monodelphis domestica ENSMODG00000016387 N 0.817
ENSONIG00000013791 Oreochromis niloticus ENSONIG00000013791 N 0.803
SALL4 Ornithorhynchus anatinus ENSOANG00000008667 N 0.781
sall3b Oryzias latipes ENSORLG00000008882 N 0.775
ENSPSIG00000009066 Pelodiscus sinensis ENSPSIG00000009066 N 0.817
ENSPFOG00000013292 Poecilia formosa ENSPFOG00000013292 N 0.758
ENSSHAG00000018013 Sarcophilus harrisii ENSSHAG00000018013 N 0.816
sall3a Takifugu rubripes ENSTRUG00000017423 N 0.813
BAA85900 Xenopus laevis BAA85900 N 0.777
sall3.S Xenopus laevis XB-GENE-17340458 N 0.798
sall4.L Xenopus laevis XB-GENE-485256 N 0.780
sall4 Xenopus tropicalis XB-GENE-485252 N 0.777
ENSXMAG00000000798 Xiphophorus maculatus ENSXMAG00000000798 N 0.758