CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_06232
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_06232
T137128_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb17
M08967_2.00
Mus musculus
SBKCCCCKCCCCCNCBBBS
SVVVGNGGGGGMGGGGMVS
Misc
Kulakovskiy et al.(2013)
ZBT17_MOUSE.H11MO.0.A
0.810
0.949
ZBTB17
M08878_2.00
Homo sapiens
YHKYYCHKCCYYCWBYYNN
NNRRVWGRRGGMDGRRMDR
Misc
Kulakovskiy et al.(2013)
ZBT17_HUMAN.H11MO.0.A
0.810
0.949
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_06232
C2H2 ZF
415
437
HKCEDCGKEFTHTGNFKRHIRIH
Pvit_06232
C2H2 ZF
443
465
FSCRECSKAFSDPAACKAHEKTH
Pvit_06232
C2H2 ZF
471
493
YSCEECGKSYRLISLLNLHKKRH
Pvit_06232
C2H2 ZF
499
521
YRCEDCGKLFTTSGNLKRHQLVH
Pvit_06232
C2H2 ZF
527
549
YQCDYCSRSFSDPTSKMRHLETH
Pvit_06232
C2H2 ZF
555
577
HKCPHCEKKFNQVGNLKAHLKIH
Pvit_06232
C2H2 ZF
583
605
LKCRECGKQFTTSGNLKRHLRIH
Pvit_06232
C2H2 ZF
611
633
YICVHCQRQFADPGALQRHIRIH
Pvit_06232
C2H2 ZF
639
661
CRCLICGKAFTQASSLIAHVRQH
Pvit_06232
C2H2 ZF
667
689
YVCERCGKRFVQSSQLANHIRHH
Pvit_06232
C2H2 ZF
695
717
HKCNVCNKAFVNVGDLSKHIIIH
Pvit_06232
C2H2 ZF
723
746
FLCERCGRGFNRVDNLRSHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy