Pvit_07170 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_07170 T137158_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLAG1
M06465_2.00 		Homo sapiens
CCCCCKWDGGCCCC
GGGGCCHWMGGGGG		 B1H
Mathelier et al.(2014)
MA0163.1 		0.817 0.981
PLAG1
M10286_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_01 		0.817 0.981
PLAG1
M10287_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_02 		0.817 0.981
PLAG1
M10288_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PLAG1_08 		0.817 0.981
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_07170 C2H2 ZF 34 56
Pvit_07170 C2H2 ZF 62 86
Pvit_07170 C2H2 ZF 92 114
Pvit_07170 C2H2 ZF 121 143
Pvit_07170 C2H2 ZF 150 172
Pvit_07170 C2H2 ZF 185 207
Pvit_07170 C2H2 ZF 213 236

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

Invalid Input OrderBy

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action