Pvit_09510 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_09510 T137230_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WT1
M00249_2.00 		Homo sapiens
NCYCCCCCVNN
NNBGGGGGRGN		 PBM
Barrera et al.(2016)
WT1_REF 		0.825 0.978
WT1
M08937_2.00 		Homo sapiens
YYYCBBYYCCTCCYYCNCBY
RVGNGRRGGAGGRRVVGRRR		 Misc
Kulakovskiy et al.(2013)
WT1_HUMAN.H11MO.0.C 		0.825 0.978
Wt1
M08968_2.00 		Mus musculus
YYYCBBYYCCTCCYYCNCBY
RVGNGRRGGAGGRRVVGRRR		 Misc
Kulakovskiy et al.(2013)
WT1_MOUSE.H11MO.0.B 		0.825 0.978
Wt1
M10337_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_02 		0.825 0.978
WT1
M10290_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_Q4 		0.825 0.978
WT1
M10291_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_Q6_01 		0.825 0.978
WT1
M10292_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_Q6_02 		0.825 0.978
WT1
M10293_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$WT1_Q6 		0.825 0.978
WT1
M00244_2.00 		Homo sapiens
NNNWAMWATATN
NATATWKTWNNN		 PBM
Barrera et al.(2016)
WT1_H373Y 		0.825 0.967
WT1
M00245_2.00 		Homo sapiens
NNNNNNN
NNNNNNN		 PBM
Barrera et al.(2016)
WT1_R366C 		0.824 0.967
WT1
M00246_2.00 		Homo sapiens
NNNNNNN
NNNNNNN		 PBM
Barrera et al.(2016)
WT1_R366L 		0.824 0.967
WT1
M00247_2.00 		Homo sapiens
NWATATDAHNN
NNDTHATATWN		 PBM
Barrera et al.(2016)
WT1_R394L 		0.824 0.967
WT1
M00248_2.00 		Homo sapiens
NNTATTWTATNNN
NNNATAWAATANN		 PBM
Barrera et al.(2016)
WT1_R394W 		0.824 0.967
WT1
M00243_2.00 		Homo sapiens
NNNNNNN
NNNNNNN		 PBM
Barrera et al.(2016)
WT1_F392L 		0.818 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_09510 C2H2 ZF 163 187
Pvit_09510 C2H2 ZF 193 217
Pvit_09510 C2H2 ZF 223 245
Pvit_09510 C2H2 ZF 254 278

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

Invalid Input OrderBy

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action