Pvit_11906 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_11906 T137307_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB48
M08391_2.00 		Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD		 ChIP-seq
Schmitges et al.(2016)
P10074.MEME 		0.801 0.939
ZBTB48
M08956_2.00 		Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV		 Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C 		0.801 0.939
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_11906 C2H2 ZF 210 233
Pvit_11906 C2H2 ZF 243 264
Pvit_11906 C2H2 ZF 274 296
Pvit_11906 C2H2 ZF 302 325
Pvit_11906 C2H2 ZF 360 383
Pvit_11906 C2H2 ZF 389 411
Pvit_11906 C2H2 ZF 417 439
Pvit_11906 C2H2 ZF 445 468
Pvit_11906 C2H2 ZF 474 496
Pvit_11906 C2H2 ZF 502 524

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

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39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action