CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_12096
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_12096
T137310_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Maz
M08988_2.00
Mus musculus
YYBYYYYYYCNSYYCCWCCYYN
NRRGGWGGRRSNGRRRRRRVRR
Misc
Kulakovskiy et al.(2013)
MAZ_MOUSE.H11MO.0.A
0.795
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_12096
C2H2 ZF
238
260
HACEMCGKAFRDVYHLNRHKLSH
Pvit_12096
C2H2 ZF
266
288
YQCPVCQQRFKRKDRMSYHVRSH
Pvit_12096
C2H2 ZF
296
319
YICSHCGKSFSRPDHLNSHVRQVH
Pvit_12096
C2H2 ZF
325
347
FKCETCEAAFATKDRLRAHTVRH
Pvit_12096
C2H2 ZF
351
372
VPCHVCGKMLSAAYITDHMKVH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy